Methanocella arvoryzae: LRC109
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Entry
LRC109 CDS
T00526
Name
(GenBank) transcription regulator (Lrp/AsnC family)
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rci03000
]
LRC109
Transcription factors [BR:
rci03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
LRC109
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
HTH_20
AsnC_trans_reg_3
AsnC_trans_reg2
HTH_5
HTH_11
DUF7343
Sigma70_r4_2
HTH_IclR
HTH_23
NirdL-like_HTH
HxlR
TrmB
HTH_Mga
MarR_2
LexA_DNA_bind
MarR
HTH_31
HTH_Crp_2
HTH_3
RepL
DUF977
Fe_dep_repress
Sulfolobus_pRN
HTH_28
wHTH-PRTase_assc
HTH_26
Motif
Other DBs
NCBI-ProteinID:
CAJ35129
UniProt:
Q0W8Z7
LinkDB
All DBs
Position
complement(3132239..3132697)
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AA seq
152 aa
AA seq
DB search
MNDSPEIDEVDSTILRLLRENARMSYLEMSRKTGISDATIQHRLKRMRERGVIDRFTVLA
NPAATGYTVTAIILVQTATEMHDEAKTALSALPEVSEVYSVLGEYDLYIKVWAKSLEELN
RFINDQIRAISGIEDLMEIVVVERVKEDAPPI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatagtccagagatagatgaggtcgactccaccatactccggcttctgcgggaa
aacgcccgcatgagctacctggagatgtcccggaaaaccggcatctctgacgctactatc
cagcacaggctgaagcggatgagggagcggggcgtaatcgacaggtttactgtcctcgcc
aatcccgccgcgaccggctacacggtcacagcgatcatactggtgcagacagccaccgag
atgcacgacgaggctaagacggcgctgtccgcgctgccggaagtgtcggaggtctacagc
gtgctgggggagtacgacctgtacataaaggtgtgggcgaaaagcctcgaggagctgaac
cggttcataaacgaccagatcagggccatcagcggcatcgaagacctgatggagatcgtc
gtcgtcgagcgggtcaaggaagatgcgcctccgatttag
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integrated database retrieval system
