Methanocella arvoryzae: LRC269
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Entry
LRC269 CDS
T00526
Name
(GenBank) conserved hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
rci
Methanocella arvoryzae
Pathway
rci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRC269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rci03019
]
LRC269
Messenger RNA biogenesis [BR:
rci03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LRC269
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
LRC269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
OB_RRP5_4th
S1
HypA
RRP4_S1
Trm112p
Auto_anti-p27
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
CAJ35251
UniProt:
Q0W8P2
LinkDB
All DBs
Position
complement(3007877..3008440)
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AA seq
187 aa
AA seq
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MTENDFVVPGDLVGTSEEYLPGSGTYEENGNIYADITGKIAINKKERAVYIEPAVHAPPV
PREGDIVIGRVTDIKGSVALVELSRIKGHLDREIAGNTSAAIHISNVKDSYVQDLAQEFG
YQDIVKARVIDTKNMRLSTVDKSLGVLTSMCSRCRVPLKFDNGKLKCPHCERRETRKLSS
DYGKGII
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagaatgattttgtcgtgcccggcgatctggtaggcacctctgaagaatacctg
ccaggcagcggaacgtacgaggagaacggaaatatatacgccgacatcaccgggaaaatt
gccatcaacaagaaagagagagcggtctacatagaaccggcagtccacgcgccgccagta
cccagggaaggcgacatcgtgatcggccgggtaaccgacatcaagggttcggtagccctc
gtggagctttcgaggatcaagggacacctggaccgggaaatcgccggcaacacctccgcc
gccatccacatatcgaacgtgaaggactcttatgttcaggatctggcccaggagttcggg
taccaggacatcgtcaaggccagggttatcgacaccaagaatatgcggctgtccacggtg
gacaagagcctcggcgtgctaacttcaatgtgctccaggtgcagggttccgctcaagttc
gacaacggcaagctgaagtgcccccactgcgagaggcgggaaaccaggaaactgtcgtcc
gactacggcaaaggcatcatataa
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