Methanocella arvoryzae: LRC3
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Entry
LRC3 CDS
T00526
Name
(GenBank) ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
LRC3
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Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAJ38222
UniProt:
Q0W071
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Position
complement(48196..50436)
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AA seq
746 aa
AA seq
DB search
MSAVDEFIREIRASDDYEGQIVHLEEIDAREPQYDDVNHILDDRLRAYLDGEKIRLYTHQ
AKAIDLALDGKNVIVSTPTASGKTLAFNIPVFQALLEDKRATALYLYPMKALSNDQLKTL
RRMDEALGTRAMPATYDGDTPQSARTTIRDKSRIIVSNPYAIHRYLAWNDRWRKFFSGLK
YIIIDEAHMYRGVFGSSVAMLLRRLLRVLKRYGSDPQFILSSATISNPEEHSKKLTGKDF
TVVSRDGSGRGKKRFVFWNPPVIGNQRASTHQETAGLITKQLDHGLQTLCFTKSRRMAEL
IAMWARDRENGLYRNEIMPYRAGYLPEDRRKIEDDLKNGRLRAVTSTNALEVGIDIGSLD
SVIISGYPGTRISTWQQAGRAGRGRDDALITLVAFDDPIDQFYMKHPDRFFGGKSEEAII
NLHNPYILMGHLICASAEMPLTANDSLYFGDISDIIEAMASSGLLRNTPRGYVYGGAKSP
SEIVSLNNISSRAVNVICDGRVLETLEVARACSEAHEGAVLLHQGETYLIESLDLNLGVA
KARRQNVDYYTEALKLSDVRIKSERSHKTVNGITVSVGDVTVTEQYYEYAVRRYEKLVGY
FPLDLPPQVFESVAVWFTLSPKYQEQLLEQGKDFDGGIHAVEHGMIAMAPVYALCDRWDL
GGLSTPLHPDTGMPTIFVYDGYEGGIGIAEKCYEIFPELAKATLEMIRDCECEDGCPACI
YSPKCGNKNAPLDKETALKILRSIVE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgttgacgagttcatcagagagatcagggcttcggacgactacgaagggcag
atcgtccacctggaggagatcgacgccagggagccccagtacgacgacgtcaaccacatc
ctggatgacaggctccgggcatatctcgacggggaaaagatcaggctgtacactcaccag
gcaaaggccattgatctcgccctcgacgggaagaacgtgatcgtcagtaccccaacggct
tccggtaaaacgctggcgttcaacatcccggtatttcaggcactgctggaggacaagagg
gcgaccgcgctctatttgtacccgatgaaggcgctgtccaacgatcagctcaagaccttg
cggcgcatggatgaagcgctgggtaccagagccatgccggcaacctacgacggcgatacg
cctcagtctgcccggactaccatcagggacaagtctcgcatcatcgtcagtaacccatat
gcaattcaccgctatttagcctggaatgaccggtggcgaaaatttttctccggcctcaaa
tacatcatcatagacgaggcacacatgtaccggggcgtattcggctccagcgtagcaatg
ctgctacggcggctgctgcgagtcctgaaaaggtacggttccgatcctcagttcatcctg
tcatctgcgacgatttcgaatccggaagagcactcgaagaagctcacaggcaaggacttt
acagtcgtatccagggatggctcgggcagagggaaaaagcgtttcgtgttctggaacccg
cccgtcatcggcaatcagcgagcctctactcaccaggaaacggccggcctcatcacgaaa
cagcttgaccacggcctgcagacgctctgctttactaaatcgaggagaatggcggagctg
atcgccatgtgggcgagagacagggagaatggcctgtacaggaatgagattatgccatac
agggccggctaccttcccgaagaccggcgcaagatcgaggacgacctgaagaacggcaga
ctgcgagctgtcacctcgactaacgccctcgaagtcggcatcgacataggctcgctggac
tctgtgatcatctcgggctatccgggtacccgaatctcgacctggcagcaggcgggccgg
gcgggccgtggccgggacgatgcgcttatcacactggtcgccttcgacgacccgatcgac
cagttctatatgaagcacccggaccgctttttcggagggaagagcgaagaggcgatcatt
aacctgcacaacccgtacatcctcatggggcacctcatatgtgcctcggctgaaatgccg
ctaacagctaacgactcactctatttcggggacatatccgatatcatcgaggcgatggcc
tcctcggggctgctcaggaatacgccgagaggatacgtgtacggcggggctaagagccca
tcagagattgtgagcctcaacaatatctccagccgggcggtgaatgtgatatgcgacggg
cgggtgctcgagacgctggaagtggcgagggcgtgctcagaagcgcatgagggtgctgtc
ctcctccaccagggcgagacatacctgatcgagagcctcgacctgaacctcggagtagca
aaggccagacggcagaacgtggactactataccgaggccctgaagctgtcggatgtaaga
ataaagtctgagcggagccacaagactgtcaacggcatcacggtctcggtgggcgacgtc
actgtcaccgaacagtattacgagtatgcagtccggcgatatgaaaagctggtcggctac
ttcccgctggacctgcccccgcaggtcttcgaatcggtggccgtctggttcaccctgtcg
ccgaagtaccaggagcagctgctggagcaggggaaagacttcgacggtggcatccatgcg
gtagagcatggcatgatcgccatggctccagtttatgcgctgtgtgacaggtgggacctg
ggcggcctgtctacgcccctgcaccccgataccggtatgcccacgatctttgtttatgac
gggtacgaaggaggcatcggcatcgccgagaagtgctacgagatcttcccggagctggca
aaagccacgctggagatgatccgtgactgcgaatgcgaggacggctgcccggcctgtatc
tactcccccaagtgcggcaacaagaatgctccgctggataaggagactgcactgaaaatt
ctcagatcgattgtagaataa
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