Methanocella arvoryzae: LRC95
Help
Entry
LRC95 CDS
T00526
Name
(GenBank) predicted metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rci
Methanocella arvoryzae
Pathway
rci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRC95
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rci03019
]
LRC95
Messenger RNA biogenesis [BR:
rci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LRC95
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
MGDG_synth
Motif
Other DBs
NCBI-ProteinID:
CAJ35117
UniProt:
Q0W909
LinkDB
All DBs
Position
complement(3143850..3145400)
Genome browser
AA seq
516 aa
AA seq
DB search
MVSVTVYDGAETIGGNKIYVENGGSGVFLDFGMNYSRYNEYFNEYLCDRDTRGIHDLLQL
NLIPKLNIYRDDLLTSDTCGCVRSYARPDVKAVLLSHAHMDHTGNMGLLDHAIPFVASSL
SLAILKAQQDVSRNAGTSAEAAYVKPRVPGDNPLVCGSAGTKTPSVGRDLYGLTEPAARL
HDLMAANPLKSKPYRPGHIGHLSELDLPFEVDAYPMDHSICGAVAYRLKSPDGTIFYTGD
FRFHGENGSQNMDRLVAGAREANVLIVEGTRTGREGDHPTTESDVYEHCKAAVDSTDKLV
IADFSARNFERLEMFARIARETGRELVITTRDVYLLAALECADGRCRMSNLLVYDAISDS
KSGCDQRLVEREYADRLLSPMEISRNPGNYILCFSFYDMKHLLDIKPNDGLYIYSSSEAF
SEEQEIDHLKLFRWLRHFNIETRGIRLATENGRPEITTEPGYHASGHIAGDELEKFIDRI
SPDIIIPVHTTAHSWFTSRFHEKVRCLKDGESFSLN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtggtatcggtaacagtatacgatggtgcggagacgatcggcggtaataaaatctacgtg
gaaaacggcggcagcggagtctttctggacttcggcatgaactactcgcgctacaatgaa
tacttcaacgaatatctctgcgacagggatacgaggggcattcacgatctgctccagctg
aacctgatacctaagctgaacatataccgtgacgatctcctgacgagtgacacttgcggc
tgcgtgaggtcgtatgcccggccggatgtgaaagcggtgctgctgagccatgcccatatg
gatcataccggcaacatggggctgctggatcatgctataccattcgtggcgtcgagcctg
agcctggcgatcctgaaggcacaacaggacgtctcgagaaacgccggcaccagcgcagag
gcagcctacgtcaagccccgtgtgcctggcgataacccgctggtctgcggctcggccggg
acgaaaacgccatcagtcggaagagacctctatgggctgacagagccggcggccagattg
cacgacctgatggcagccaatcctctcaagtcaaagccttaccggccaggccacatcggc
cacctctccgagctggatctgccctttgaagtggacgcctatcccatggaccactcgatc
tgcggcgccgtcgcctaccggctcaaatcaccagacggcaccatattctacacaggcgac
ttccgattccacggcgaaaacggcagccagaacatggatcgcctcgtcgccggtgccagg
gaagctaatgtgctgatcgtcgaaggcaccaggacaggccgggaaggtgatcaccctacg
acggagagtgatgtttacgagcattgcaaggctgccgtcgacagtacggataagctggtg
atcgctgatttttctgccaggaacttcgagcggctggagatgtttgccaggattgccaga
gaaactggcagagagctggtgatcacgaccagggacgtctacctgcttgctgcacttgag
tgcgcagacggcaggtgcaggatgagtaacttactggtctacgacgcgatcagcgacagt
aaatcgggctgcgatcagcggctggtggagcgagagtatgcagatcgattgctgagcccc
atggaaatatcaagaaatccggggaactacattctgtgcttctctttctatgatatgaag
cacctgctggacatcaagccgaacgacggattgtacatctattcgtcgagcgaggcgttc
tcggaggagcaggagatcgatcacctgaagctattcaggtggctccggcatttcaacatc
gagacccggggcatcaggctggctaccgagaatggccggcccgaaataacgacagagccc
ggctatcacgcatcaggtcacattgccggagatgagctggaaaagttcattgacagaatt
tcaccggacatcattatacctgttcacaccaccgctcattcgtggtttacaagccggttc
cacgaaaaagtcaggtgcctgaaagacggggaaagtttcagcctgaattaa
DBGET
integrated database retrieval system
