Methanocella arvoryzae: RCIX105
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Entry
RCIX105 CDS
T00526
Name
(GenBank) transcription regulator (AsnC/Lrp family)
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rci03000
]
RCIX105
Transcription factors [BR:
rci03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RCIX105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
AsnC_trans_reg
HTH_24
HTH_11
HTH_38
MarR
NirdL-like_HTH
HTH_23
HTH_20
MarR_2
Sigma70_r4_2
Fe_dep_repress
HTH_31
HTH_28
CENP-B_N
LexA_DNA_bind
HTH_30
MLLE_2
HTH_10
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
CAJ35606
UniProt:
Q0W7N7
LinkDB
All DBs
Position
complement(2626142..2626645)
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AA seq
167 aa
AA seq
DB search
MNEMSSKFKGNLDDTDLFIIRRLCEDSNTSLAAIGEELNVSPSTIHKRICRLKDGGIIER
FTILFDPSILELNTIAFVGIELERSAMVGKKKEEVINRLLALREVLEIHETLEPFDLMLK
LRTRDVDLLREVIGNISAIDGVMATNTILTTRKILETPLKYDNLKEV
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaaatgagctccaagttcaaaggcaacctcgacgacacagacctctttatcatc
aggagactctgcgaagacagcaacacttcgctcgccgccatcggtgaagagctgaatgta
tcgccttccaccatccacaagcgcatttgtcggctgaaggacggggggattatcgaacgc
tttaccatcctgttcgacccttcgattctcgagctcaacacgatcgcctttgtcggcatc
gagctggaacgcagcgcgatggtgggcaaaaagaaagaggaggtcatcaacagactgctc
gcgcttagagaagtgctggagatccatgaaactctggagccattcgacctcatgctgaag
ctccgcaccagagacgtagacctgctgcgggaagtcatcggcaacatatcggccatcgac
ggagtcatggcgaccaacacgatcctgaccacccgcaagatcctggagacgccactcaag
tacgacaatctgaaagaagtctga
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integrated database retrieval system
