Methanocella arvoryzae: RCIX1135
Help
Entry
RCIX1135 CDS
T00526
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rci03019
]
RCIX1135
Messenger RNA biogenesis [BR:
rci03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
RCIX1135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
SNF2-rel_dom
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
CAJ36441
UniProt:
Q0W5A2
LinkDB
All DBs
Position
1775487..1778069
Genome browser
AA seq
860 aa
AA seq
DB search
MALYVVFVPYRKDEYRVYPVKGEGTPVFSGVLTVQETSRGIRPLKVRVIKEKGDEYLPVS
TFTELLKAADCLFTTMMADAQEQPLNDMLKAYQLTSQRIGVCRFCLMEDKITFRKPDMVR
FKSELVCLDCAKKELKRELSFRGRITSKGLDRMEAILEKTRDLNRVLALLNPSNLPPELT
KFDLIPAAESRIKPVKVSDLKIDPKLKEVLLGKVESLLPVQSKSVSSGLLEGKSQLVVSA
TATGKTLIGELAGVNNILAGKGKMLFLVPLVALANQKYEQFKKRYSPLGLKTAIRVGTSR
ISLNSVKLNTSLDSDIVVGTYEGLDYVLRTSGPAGVKKIGTVVIDEVHMLEDPERGHRLD
GLIARLKACAPAAQFVFLSATIGNPKEVAKHLGGTLVEYEHRPVPLERHLIFAQEHEKYR
LIDEYASKEYSKTSSKGFKGQTIVFTNSRKKCHSISQALRINSAPYHAGLTYPQRKSVED
RFAKGEIKVVVTTAALAAGVDFPASQVIFESLAMGKDWLSVSEFQQMQGRAGRPDFHDLG
KVVVLSDPDSTIEGESEEEVAFRLLGGSAEHVNVCYDEPEQMEECLANTSVAPEEKVLEK
INDGMLGITCPTSALVQKCVSGGLLVKEKGLVKQTQMGRAVVTHFLSVANALLIRDRLRK
KVAPLDIAVELEAFDAVYFRGADRLSKIIGISVPSRVFSPSSLDIVFSCDAIAKMDHGMR
DQFLEFSADFLDCVCEDSPFCGCAERKFSKKLIAYRLKGKDPHGIARAIAADYNLNAFEG
DILGYLDRTVRNLDAVHEIARIERLNPAAAEAKLLREGVEDPEKITQEQYNALVGTTRKR
TYAPRKKAKAALDDDEDEDY
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgctatacgtcgttttcgtgccctaccgcaaggacgagtaccgggtctaccctgtg
aaaggcgagggcacgcccgtcttctcgggcgtgctcaccgtgcaggagacctccaggggc
atcaggccgctcaaggtgagggtgatcaaggaaaagggagacgagtacctgccggtgtcg
acgttcacggaactgctcaaggccgccgactgcctttttaccacgatgatggcggacgcc
caggagcagccgctcaacgacatgctgaaagcctaccagctcacgtcccagaggataggc
gtctgccggttctgcctgatggaggataagatcaccttcaggaagcccgacatggtcagg
ttcaagagcgagctggtctgcctggactgcgccaaaaaagagctgaagagggagctgagc
ttccggggcaggatcacttcgaagggcctcgaccggatggaggccatcctcgagaagacg
agggacctgaaccgggtgctcgccctgctcaacccgtccaacctgcccccggagctgacg
aagttcgacctgatcccggcggcggagtcgaggattaagccggtgaaggtctccgacctc
aagatcgacccgaaactcaaagaggtactcctcggcaaggtggagagcctcctcccggtg
cagtccaaatcggtgagctccggcctgctcgaaggcaagagccagctcgtcgtctcggcc
accgccacgggcaagacgctgatcggcgagctcgcgggcgtcaacaacatcctggccggc
aaagggaagatgctgttcctggtgccgctggtcgcgctggccaaccagaagtacgagcag
ttcaagaagcggtactcccccctcgggctgaagaccgccatccgggtgggcacgtcccgg
atttccctgaactcggtcaagctgaacacctcgctggactcggacatcgtggtgggcacg
tacgagggcctggactacgtgctccgcacctccggccccgccggggtaaaaaagatcggc
accgtggtgatcgacgaggtgcacatgctggaggacccggagagaggccaccggctggac
gggctcatagcgaggctcaaggcctgcgcccccgccgcccagttcgtctttttatcggcg
accatcggcaacccgaaagaggtggcaaagcacctgggcgggacgctggtcgagtacgag
cacaggcccgtgcctctcgaaaggcacctgatcttcgcgcaggagcacgagaagtaccgc
ctcatcgacgagtacgcctccaaggagtactcgaagacctcctcgaaaggcttcaagggc
cagaccatcgtcttcaccaactccaggaagaagtgccactccatcagccaggcgctccgc
atcaactccgccccataccacgccggcctgacgtacccgcagcgcaagagcgtggaggac
cggttcgcgaagggcgagatcaaggtagtggtcaccacggcagctcttgcggcaggcgtg
gacttccccgcctcgcaggtgatcttcgagtccctggcgatgggcaaagactggctgtcg
gtcagcgagttccagcagatgcagggcagggcgggcaggccagacttccacgacctcggc
aaggtcgtcgtcctctccgaccccgacagcaccatcgagggggagagcgaggaagaggtc
gcattccgcctgctgggcggcagcgccgagcacgtgaacgtctgctatgacgagccggag
cagatggaggaatgcctggcgaatactagcgtcgcaccggaggagaaggtgctggagaag
atcaacgacgggatgctgggcatcacctgcccgacctctgcgctggtccagaaatgcgtc
tccggcggcctgctggtcaaagaaaagggcctggtgaagcagacgcagatgggccgggct
gtcgtgactcatttcctcagcgtcgcgaacgccctcctgatccgggaccggctgcgaaag
aaggtcgccccgctggacatcgccgtcgagctggaggcgttcgacgccgtgtacttcaga
ggagcagacaggttatcgaagatcatcggcatcagcgtgccctcaagggtgttcagcccg
tccagcctcgacatcgtcttctcctgcgacgcgatagcgaagatggaccacgggatgcgg
gaccagttcctggagttcagcgccgacttcctggactgcgtgtgcgaggacagcccgttc
tgcggctgcgccgagcgcaagttcagcaagaagctgatcgcctatcgtctgaaaggaaaa
gacccccacggcatagcgagagcgatagccgccgactacaacctgaacgccttcgaaggc
gacatcctgggatatctggatcgcacggtgagaaacctggacgccgtccacgagatcgcc
cgcatcgagcggctcaacccggccgccgcggaggctaagttactgagagagggcgtcgag
gatccggagaagatcacccaggagcagtacaacgctttagtgggcaccaccaggaaacgg
acgtatgcgccgagaaagaaggcgaaagctgcgctggacgacgatgaggacgaggactac
tag
DBGET
integrated database retrieval system
