Methanocella arvoryzae: RCIX1189
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Entry
RCIX1189 CDS
T00526
Name
(GenBank) putative transcription regulator (TrmB family)
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rci03000
]
RCIX1189
Transcription factors [BR:
rci03000
]
Prokaryotic type
Helix-turn-helix
Other families
RCIX1189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Penicillinase_R
HTH_5
HTH_IclR
MarR_2
Regulator_TrmB
Fe_dep_repress
DUF7342
HTH_Cmi2_C
Gemini_AC4_5
DUF2250
Motif
Other DBs
NCBI-ProteinID:
CAJ36500
UniProt:
Q0W543
LinkDB
All DBs
Position
1723517..1724341
Genome browser
AA seq
274 aa
AA seq
DB search
MKPISSNLVDSLKTLGLTEYEAKVYSALVLFDRAEVKQIYEYLDAPKPSVYQSLKTLMDK
GLVQVVNAKPAVYRATPPKIAIKHLTEIHRSAEEAALQELEELEQSRIEQDLPDMLWTVY
GEVNIGHSIEEMLTDARRSVKLILPDAYLHHLEHLRDREITVDLITFGADLSIPGKYGLK
YLTMKDAFGVDLHDLEPILKNIRLPMPSSNLTRLVLMAVDDDRFMYVPPLPSQNRSGITT
SNPMINALAQMVFQTLWERMPFTYPESNKPGHHP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatatcgagcaaccttgtcgattcactgaagaccctcggcctcacggaatac
gaagccaaggtctactccgccctcgtgctcttcgacagggcggaagtcaagcagatatac
gaatacttagatgcccccaagcccagcgtctaccagagcttaaagacattgatggacaaa
ggcctcgtccaggtggtcaacgccaagccagccgtgtaccgggccaccccgccgaagatc
gccatcaagcacctcaccgaaatccaccgcagcgccgaagaagcggctctgcaggagctg
gaggagctggagcagagccggatcgagcaggacctgcccgacatgctctggaccgtgtac
ggcgaggtaaacatcggccactcgatcgaggagatgctgaccgacgccaggcggtcggta
aagctcatcctgcccgacgcgtacctgcaccacctggaacacctcagggacagggaaata
actgtagacctcatcaccttcggggcagacctctcgatacccggaaaatacggcctgaag
tacctgaccatgaaagacgcatttggcgtcgacctgcacgacctggagcccatcctgaaa
aacatccggctgcccatgccgtcgtcgaacctgacccggctcgtcctgatggcggtggac
gatgacaggttcatgtacgtgcctcccctgcccagccagaacaggtcggggatcaccacc
agcaaccccatgatcaacgctctggcacagatggtttttcagactctctgggagcgcatg
cccttcacgtacccggagagcaacaagcctggccaccacccgtaa
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