Methanocella arvoryzae: RCIX1323
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Entry
RCIX1323 CDS
T00526
Symbol
amyA
Name
(GenBank) putative alpha-amylase
KO
K07405
alpha-amylase [EC:
3.2.1.1
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00500
Starch and sucrose metabolism
rci01100
Metabolic pathways
rci01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RCIX1323 (amyA)
Enzymes [BR:
rci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
RCIX1323 (amyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_57
DUF5752
Antimicrobial_9
Motif
Other DBs
NCBI-ProteinID:
CAJ36612
UniProt:
Q0W4T1
LinkDB
All DBs
Position
complement(1613080..1614585)
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AA seq
501 aa
AA seq
DB search
MTRLCIGFEVHQPYRLNSGFRPGNYGGKSPEEAYFSGINREILERVCRKCYNPATALVLE
LLDQGFKCAFSLSGTLVEQLEKWEPDTLGLFEEVARHRNAEMLCQTYYHSVASLFDDPSE
FEEQVRLHRQLMRDAFGVTPAVMENTEFLFNNAIAESAKRLGFKAIYSEGVERLLGWRSP
NYVYSCRGINLLLRNYQLSDDIAFRFTNRQWPEWPLTADKYASWLAATPGDYVNVFIDYE
TFGEHQWEDTGIFEFLRWLPRECKARGVEFWKPSEIASLPAAEALNVEETVSWADVEKDI
SAWLGNTMQHMAIKEVQRGEAFASDKKTWRLLQTSDHFYYMASKFGSCGDVHSYFSPEAC
TNIEAFDMYMRVLSDFELRAAQKMKPKQVAMELRCLPPEQAFRFRTPRAYTGFSAYSLDD
FADLLNFVPEDSLQYHLSRDDYSSWIRDVLNDPGLAEDVSKCGNRIELLEVTDRRRKELW
SRLKGAGPAERRREEVWSRSR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggctttgcattggatttgaggtccaccagccgtaccggctgaactcgggattc
cggccggggaactacggcgggaaaagccctgaggaggcttactttagcggcatcaacagg
gagatccttgagcgggtctgccggaagtgctataatcccgccactgcgctggtgctggag
ctgctggatcagggcttcaagtgcgcgttcagcctttcggggacgctggtagagcagctt
gagaaatgggagccggacacgctggggctgttcgaggaggtcgcccggcaccggaacgcc
gaaatgttgtgccagacgtattaccacagcgtggccagcctgttcgacgacccctctgaa
tttgaggagcaggtgaggctgcacaggcagttaatgagagacgcgttcggcgtcacgcct
gcagtgatggagaacactgagttcctcttcaacaacgccatagcagagtcggcaaagcgt
ctcggcttcaaggcgatctactccgagggcgtggagcggctgctgggctggcgaagcccg
aactacgtgtactcctgtcggggcataaatctgctattgagaaattatcagctgtcggac
gacatcgcgttccgctttactaacaggcagtggccggagtggccgctgacggcggacaag
tacgcgtcctggctggcggcgacgccaggggattacgtgaacgtcttcatcgactacgag
acgttcggggagcaccagtgggaggacacaggcatcttcgagttcctccggtggctgccc
cgggagtgtaaagcccgtggtgtcgagttctggaagccctcggagatcgcctctttgccg
gcggcggaggcgctgaacgtcgaggagacggtgtcctgggcggacgtggagaaggacatc
tcggcgtggctgggcaacacgatgcagcacatggcgatcaaggaggtccagaggggcgag
gctttcgccagcgataaaaagacctggcggctcctgcagaccagcgatcacttctattat
atggcctccaagttcgggtcgtgcggggacgtgcactcgtacttcagcccggaggcctgc
accaacatcgaggcgttcgacatgtacatgcgggtgctctccgatttcgagctgcgggcg
gcgcagaagatgaagccgaagcaggtggcgatggagctgaggtgcctgcctcccgagcag
gctttcaggttccgcactccccgggcgtacacgggcttttcagcttatagcctggacgat
ttcgccgacctgctgaacttcgtgcctgaggactcgctgcagtaccacctgagccgggac
gactactcttcctggatcagggacgtgctgaacgatccggggctggccgaggacgtgtcg
aagtgcgggaaccgcattgagcttttagaggtgacagaccggaggagaaaggaactgtgg
agccgcctgaagggggcaggaccggcggagcggcggagggaggaagtgtggagtcgctca
agatag
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