Methanocella arvoryzae: RCIX1369
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Entry
RCIX1369 CDS
T00526
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00220
Arginine biosynthesis
rci00240
Pyrimidine metabolism
rci00250
Alanine, aspartate and glutamate metabolism
rci01100
Metabolic pathways
rci01110
Biosynthesis of secondary metabolites
rci01240
Biosynthesis of cofactors
Module
rci_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RCIX1369 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RCIX1369 (carB)
00220 Arginine biosynthesis
RCIX1369 (carB)
Enzymes [BR:
rci01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RCIX1369 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
CAJ36650
UniProt:
Q0W4P3
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All DBs
Position
complement(1572431..1575673)
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AA seq
1080 aa
AA seq
DB search
MPKRTDIKKVLLIGSGPILIGQAAEFDFSGSQACRSLREEGIQVVLVNSNPATIMTDPEM
ADAVYVEPITPQVVAQIIEKERPDGIIAGLGGQTGLNITSELAEMGVLEKFNVKLLGTPL
KAIYDTEDRDRFKHAMESIGEKVPRSIPCHSVEEAVKAVETLGLPMIIRSAFTLGGTGSG
VARTIEEVRQIAEIGIKRSRIHQILVEESILGWKEFEYEVMRDASDTCITICNMENVDPM
GIHTGESIVVTPSQTLSDADHQKLRTAAIKIIRALGIEGGCNIQFAWKDGDYRIVEVNPR
VSRSSALASKATGYPIARIAAKIAIGLRLDEIRNKVTMETPASFEPTIDYVVVKIPRWPF
DKFKTADKHLTTSMKSTGEVMAIGRSYEEALQKALNSLDISEFWGYGNWSKDEMAEILSK
PTHERMFVIFKALRTGAFTVEEIAKLSNIDPWFILKIKNIVDMAEKLKSAPLDRDLLLKA
KRLGFTDEWIAEIRGVTQEEISDLRHKLGIIPTYKMVDTCAAEFAASTPYYYSCYEQECE
LAPSDRKKVLIIGAGPIRIGQGIEFDYCTVHAVQALRESGIEAHIINNNPETVSTDFDTS
DKLFFEPITLEHVMNIIEKERPFGVMVQFGGQTSVNLAIPLQMELNRRKDLNTVIIGTSP
DDMNIAEDRDLWSRLMKEQGILQPESGIAYSIDDAKAVARRIGFPILVRPSYVLGGRAME
VVYDEADLERYMTEAVKVSRKHPVLIDDFLENAVEIDVDAVCDGKDVLIGAIMEHIEEAG
IHSGDSACVIPPQSLSPDVMDQVRVIVRKIALALRVVGCINLQMAYKDGKVYVLEANPRS
SRTIPFVSKATGAPLAKLAAKAIIGHSLKDLGYTEEPKPRHVSVKEVVLPFDKLPGADPV
LGPEMKSTGEVMGIDLDFGRAFFKAELSAFNSLPQEGTIFMSVRDADKEHMVKIAKILHD
NGLQLIGTAGTKEFLESHGIPIRQVLKVSEGSPNVIDLMREGKVQLVINTPTSKQARMDG
FQIRRAAVDYEVPYATTLQAAKASADAINAMGRRKPTIRSLNEYLDMDRPVAPVIDAAKE
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagaacggacatcaagaaagtattattaataggctcggggcccatcctcatc
ggccaggccgccgagttcgactttagcggcagccaggcctgccgctcgttgagggaagag
ggcatccaggtcgtcctggtcaactccaacccggcgaccatcatgactgacccggagatg
gccgacgccgtgtacgtcgagcctattacgccgcaggtcgtcgcccagatcatcgagaag
gagcgccccgacggcatcatcgcgggcctcggaggtcagaccggcctcaacatcaccagc
gagctggccgagatgggcgtgctggagaagttcaacgtcaaactgctgggaacgccgctc
aaggcaatctacgataccgaggaccgggaccggttcaagcacgcgatggagagcatcggc
gagaaggtgccgaggtccatcccctgccactccgtagaagaggcggtcaaggcggtcgaa
acgctgggcctgccgatgatcatccgctccgccttcactttaggcggcaccggcagcggc
gtcgcccgcaccatagaagaggtaaggcagatcgcagagatcggcatcaagcgctcccgc
attcaccagatcctcgtcgaggagagcatcctcgggtggaaggagttcgagtacgaggtc
atgagggacgccagcgacacctgcatcactatctgtaacatggagaacgtcgacccgatg
gggattcacaccggcgagtccatcgtcgtgacgccgtcccagacgctgtccgacgcagac
caccagaagctgcgcacggcggcaatcaagatcatcagggccctgggaatcgagggcggg
tgcaacatccagttcgcctggaaggacggggactaccgcatagtggaagtcaacccccgt
gtctcaaggtcttccgcgctggccagcaaggccacgggctatccaatagcccggatcgcc
gccaagatcgccatcggcctgcggctggacgagatcaggaacaaggtcaccatggagacc
cctgcctccttcgagccgaccatcgactacgtggttgtaaaaatcccgcgttggcccttt
gacaagttcaagaccgcggacaagcacctcaccacctcgatgaagtccaccggagaagtc
atggcgatcggccgctcctacgaagaggcgctgcagaaggcgctcaactccctggacatc
agcgagttctggggctacggcaactggtccaaggacgagatggcggagatcctgtcgaaa
cctacccacgagcgcatgttcgtcatcttcaaggcgctccgcaccggagcgttcaccgtg
gaggagatcgctaagctctccaacatagacccatggttcatcctcaagatcaagaacatc
gtcgacatggccgagaagctgaagtccgccccgctcgaccgggacctcctgctgaaggcg
aagcggttagggtttacggacgagtggatcgccgagatccggggagtcacccaggaggag
atcagcgacctgaggcataagctcggcatcatccccacgtacaagatggtggacacctgc
gccgcggagttcgcggccagcacgccctactactattcctgctacgagcaggaatgcgag
ctcgcgccctcggacaggaagaaggtgctcatcatcggcgccggcccgattagaatcggc
cagggcatcgagttcgactactgtactgtgcacgctgtccaggctctcagggaatcgggc
atcgaggcgcacatcatcaacaacaaccccgagaccgtgtcgaccgacttcgacacgtct
gacaagctcttcttcgagccgatcacgctggagcacgtgatgaacatcatcgagaaggag
cgtcccttcggcgtcatggtccagttcggcggccagacctcagtaaacctggccatcccc
ctccagatggagctgaaccgcaggaaagaccttaataccgtcatcataggcaccagcccg
gacgacatgaacatcgccgaagaccgggacctgtggagccggttgatgaaggagcagggc
atccttcagccggaaagcggcatcgcctactccatcgacgatgctaaggcggtcgcccgc
agaatcggcttccccatcctcgtgaggccgtcgtacgtgctgggcggcagggccatggag
gtcgtctacgacgaggccgacctcgagcggtacatgaccgaagcggtcaaggtcagccgc
aagcatcccgtccttatcgacgacttcctggagaacgcagtagagatcgacgtggacgcg
gtgtgcgacggcaaggacgtcctgatcggcgccatcatggagcacatcgaggaggccggt
atccactccggcgactccgcttgtgtcatcccgccccagtcgctgtcccccgatgtaatg
gaccaggtccgggtcatcgtgaggaagatcgcgctcgccctccgggtagtgggctgcatc
aacctgcagatggcctacaaggatggcaaggtctacgtgctggaggcaaacccccggtcc
tcgaggacgatcccgttcgtcagcaaggccaccggagcccccctcgcaaagctggctgca
aaggccatcatcggccactcgctaaaggacctgggctacacggaagagccgaagcccagg
cacgtctccgtcaaagaagtcgtgctgcccttcgacaagctgcccggcgcagacccggtg
ctcggccccgagatgaagtccacgggagaagtcatgggcatcgacctcgacttcggcagg
gcgttcttcaaagccgaactgtcagccttcaactcgctgcctcaggagggcaccatcttc
atgtccgtccgggacgcagacaaggagcacatggtgaagatcgccaagatcctccacgac
aacggcctgcaactaatcggcaccgccggcaccaaggagttcctcgagtcccacggaata
cccatcaggcaggtgctcaaggtctccgaaggcagccccaacgtcatcgacctgatgagg
gaaggcaaggtccagctggtcatcaacaccccgacgtccaagcaggccaggatggacggc
ttccagatccgccgcgcggcagtcgactacgaggtgccgtacgccaccaccctgcaggct
gcgaaggcatccgccgacgccatcaacgccatgggcagacgcaagcccaccatcaggtct
ctcaacgagtacctggacatggacaggcccgttgcccccgtcatagacgccgccaaagag
taa
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