Methanocella arvoryzae: RCIX1772
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Entry
RCIX1772 CDS
T00526
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rci
Methanocella arvoryzae
Pathway
rci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RCIX1772 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rci03019
]
RCIX1772 (recQ)
03400 DNA repair and recombination proteins [BR:
rci03400
]
RCIX1772 (recQ)
Enzymes [BR:
rci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCIX1772 (recQ)
Messenger RNA biogenesis [BR:
rci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RCIX1772 (recQ)
DNA repair and recombination proteins [BR:
rci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCIX1772 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAJ36975
UniProt:
Q0W3R8
LinkDB
All DBs
Position
1263719..1265536
Genome browser
AA seq
605 aa
AA seq
DB search
MEMAVDKQLLRDTLERYFGYSTFRPFQEEIVTDVLEGRDVLAIIATGGGKSLCYQLPALV
SGGLTIVVSPLISLMKDQVDDLLARNISAATLNSSMELWEIRSIEDQLLGGKIKVLYISP
ERITQDSCLQFLEKLDVKLIAIDEAHCISMWGHQFRPDYRRLSLLKSKFPKVPMIALTAS
AIPEVREDIASQLKLVSPKKYLGSFNRINLRYEVREKKDATAQILSYIARNRGKSGIVYC
LARKTTEELAEKLRRAGIKALPYHADLPDTVRSATQEKFVRDDVEVVCATVAFGMGIDKP
DVRYVIHYDMPKNLEAYYQETGRAGRDGEASDCIMFYSPADALKMRGLLEKEYTDYHLSR
VAMKKWQAMRDFCETRLCRRKYLLSYFGEEYDDPACDGCDNCLHPKDTIDGRDIANKIVT
CVTALGGKFGAGHVADVICGSSNQTIIAYRHNRNPAYNTGKPYTRVQWIGFIKELVRLGY
LSVAGDKYPVITTNSRSKEVTFIQELRLTRPTSGGEAAFKPAVQEKYDARLFQQLRSLRK
SIADANGWPPYVVFHDTTLREMATTCPKTLAELSKISGVGKAKLEKYGGEFVGVIKGYVE
AEGIA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcagtcgacaaacagttattgcgggatactctcgagcgctattttggctac
agtactttcaggccgtttcaggaggagatcgtcaccgacgtgctcgaaggacgggacgtc
cttgccattattgccaccggcggcggcaaatcgctctgctaccagcttcccgccctcgta
tcgggcgggctgacgatcgtcgtctctcccttaatctcgctgatgaaggaccaggtggac
gacctcctcgcgagaaacatttctgccgccacattgaacagctcgatggagctgtgggag
atccggtcgatcgaggatcagctgctcggggggaagatcaaggtgctgtacatttccccg
gagaggattacgcaggactcgtgtttgcagttcctggaaaagctggacgtgaaactgatc
gctatcgacgaggctcactgtatctccatgtggggccaccagttcaggccggactacaga
aggctatcgctgctcaagagtaaattcccgaaagtccctatgattgccctgactgcctcc
gccatacctgaggtcagagaagatatcgccagccagctcaagcttgtctccccgaagaag
tacctcggcagctttaaccggataaatttgaggtacgaggtccgggagaagaaggatgcc
acagcccagatcctctcctacattgcaagaaaccggggcaagtcgggcatcgtttactgc
ctggcgaggaagactacggaagagctggcggaaaagctgcgcagggcgggcatcaaggcg
ctgccctaccacgccgacctgcctgatacggtccgatctgccacgcaggagaagttcgtc
cgtgacgatgtggaggtcgtttgcgcgacagtcgccttcgggatgggcatcgacaagccg
gacgtgcggtatgtcatacactacgatatgcccaagaacctggaagcgtactaccaggag
accggacgggccggcagggatggagaggcaagcgattgtattatgttctactcgcctgcg
gacgctttaaaaatgagaggcctgctggaaaaagagtacaccgattaccacctgagccgg
gtagccatgaaaaagtggcaggccatgagggacttctgcgagacccgcctctgccgcagg
aaatacctgttaagctacttcggggaagaatatgatgatccggcctgcgacggctgcgat
aactgcctgcatccgaaagacaccatcgacggtagggacatcgcaaacaaaatcgttacc
tgtgtcacggcgctgggcggcaagttcggagccggccacgtagcagacgtaatctgcggc
tcctcaaaccagacgatcatcgcctaccggcacaaccggaatcctgcctacaacaccggc
aagccgtacaccagagtccagtggatcggcttcatcaaagagctggtccggctcggctat
ctgtcagtagcgggagacaagtacccggtcatcaccaccaacagcaggtcgaaggaagtg
accttcatccaggaactgcggctgaccaggccgacatcaggcggagaggcggccttcaag
cctgccgttcaggaaaaatacgatgccaggctcttccagcagctcagaagcttgcgaaag
agcatcgcagacgccaatggctggccgccttacgtagtattccatgatacgacgctgaga
gagatggccacgacctgcccaaagacgctggccgaactgtccaaaatttcgggagtcggc
aaggcgaagctcgaaaagtacggcggggagttcgtgggagtcatcaaagggtatgtcgag
gctgagggtatcgcttag
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