Methanocella arvoryzae: RCIX1785
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Entry
RCIX1785 CDS
T00526
Name
(GenBank) putative transcription regulator (TrmB family)
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rci03000
]
RCIX1785
Transcription factors [BR:
rci03000
]
Prokaryotic type
Helix-turn-helix
Other families
RCIX1785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAJ36986
UniProt:
Q0W3Q7
LinkDB
All DBs
Position
complement(1251770..1252591)
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AA seq
273 aa
AA seq
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MEQHFDEKTLSKLSMFGMTEYESKVYLTLLVKGAQEASKVSRYSGLPRPHTYSVLKTLQM
RGLVTVIPESVNRYRAVPLDEGLDLLIEEKEKQFSSLRIARDQLLSEIKPKEAIPDGSHS
IVSLYYGRQNVYKLVDEMFQRCEHDVDIMTTSHGIVRFYKYFSDVASQFRRKDIAVRFIA
PITPDVEDVAQKLARLVELRRIDTLPPIRFVLVDGKEVLFAEYPEDDFKSTGKETGIWIN
QPELGRMMKTLFDNTWKTTTAYPELQKTTEKED
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcatttcgacgaaaaaacgctgtcaaagctcagcatgttcgggatgacggaa
tacgagtccaaggtctacctgacgctcctggtcaaaggcgcccaggaggccagcaaagta
tcccggtactcaggccttccccgcccgcacacttattccgttttgaaaaccctgcagatg
cgcggcctcgtcactgtcatacccgaatcggtgaaccgctaccgtgcggtgccgctggac
gaagggctggacctgctcatcgaggagaaggagaaacagttctcgtccctccgcatcgcc
cgggaccagctcctgtcggagatcaagccgaaggaagcgatccccgacggcagccattcc
atcgtttccctgtactacggccggcagaacgtctacaagctggtcgacgagatgttccag
cggtgcgagcacgacgtggatatcatgaccacttcccacggcatcgtccggttctacaaa
tacttcagcgacgtggcctcgcagttccggagaaaggacatcgccgtccggtttattgcc
ccgatcactcctgacgtggaggacgtcgcccagaagctggcccggctggtagagctccgg
cgaatcgacacgctgccccccatccggttcgtgctggtggacggcaaagaggtactgttc
gccgagtaccccgaagacgacttcaagtctacgggcaaagagaccggcatctggatcaac
cagcccgagctgggccggatgatgaagacgctgttcgacaacacatggaagactaccact
gcttatcctgagctgcagaaaacgacggaaaaagaggactga
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