Methanocella arvoryzae: RCIX1963
Help
Entry
RCIX1963 CDS
T00526
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00300
Lysine biosynthesis
rci00470
D-Amino acid metabolism
rci01100
Metabolic pathways
rci01110
Biosynthesis of secondary metabolites
rci01120
Microbial metabolism in diverse environments
rci01230
Biosynthesis of amino acids
Module
rci_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCIX1963 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RCIX1963 (lysA)
Enzymes [BR:
rci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RCIX1963 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S6PP
Motif
Other DBs
NCBI-ProteinID:
CAJ37126
UniProt:
Q0W3B7
LinkDB
All DBs
Position
complement(1113530..1114813)
Genome browser
AA seq
427 aa
AA seq
DB search
MKAYEIPGHLEVKGNHLTIGGVDAVSLAETYGTPLYVTNEDRLRDNYRRFSAAFPGVSIF
FAAKSNNNLVVQRIFAQEGAGADAFSDGEIYLARMAGIPAEKILFTGNSKTDAELQYAID
SGVMVSVDSRDELLALSKLAKKAKKEVKIAFRVNPDVSADAHPKLATGLKVSKFGIPTKD
IVSIYKEAKKLPGVNPVGIHCHIGSQILETAPYTEATNKMMDLVEQISGFIDLEWVDLGG
GFGIPYQKGTKVPTPKDWAKAILPTFKARCKKIGISPELHLEPGRYMVADSTVLLMRVNT
VKKAYKNFVGTDAGFNTLIRPAMYDSYHEAVIANKAGSPAKGEYTVVGPICESGDILATD
RQLPVVEKDDIVALLDAGAYGFCMSSQYVGRPRCAEVLVHNGKADLIRKRETFDDLLQNQ
IMPGRLL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttacgaaatccccggccacctggaggtcaagggcaaccatctcactataggc
ggagttgacgctgtcagcctcgctgaaacctacgggacgccgctctacgtgacgaacgaa
gaccgcctgcgggacaactaccggcggttttccgccgcattccccggcgtgtccattttc
ttcgcggccaagtcgaacaacaacctggtcgtccagcgcatcttcgctcaggaaggcgca
ggcgcggacgccttttccgacggtgagatttacctcgcccgcatggccggcatccccgca
gagaagatcctgtttacgggcaactctaagacggacgccgaactgcagtacgcaatcgac
tccggcgtcatggtctcggtggactcccgggacgaactgctggcgctgtcgaaactggcc
aaaaaggcgaagaaggaagtcaagatcgccttccgggtgaaccccgacgtatccgcggac
gcccaccccaagctcgcgaccgggctaaaggtctccaagttcggcattccgacgaaggat
atcgtatcgatatataaggaggcaaagaagcttccgggcgtaaacccggtcggtatccac
tgccacatcggatctcaaatcttagaaaccgctccctatacggaggccaccaacaagatg
atggacctcgtggagcagatcagcggcttcatcgacctggaatgggtcgacctgggcgga
ggcttcggcatcccctaccagaagggaacgaaagtcccgaccccgaaggactgggctaag
gctatcctgccgaccttcaaggcgagatgtaagaagatcggcatcagccccgagctccat
ctcgagccgggcaggtacatggtcgcagacagcaccgtcctgctcatgagggtgaacact
gtgaagaaggcctacaagaacttcgtcggcaccgacgcgggcttcaacactctgatacgg
ccggcaatgtacgactcgtaccacgaggctgtaatagccaacaaagccgggtcccctgcg
aagggcgagtacactgtcgtaggcccgatctgcgagtccggcgacatcctggctaccgac
aggcagctgccagtggtggagaaggacgatatcgtggcgctgctcgacgcgggcgcctac
ggcttctgcatgagttcccagtacgtgggccggccgaggtgcgccgaggtgctcgtccac
aacggcaaggcagacctgatcaggaagcgggagacgttcgacgacctgttgcagaaccag
atcatgccaggcaggttactgtaa
DBGET
integrated database retrieval system