Methanocella arvoryzae: RCIX200
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Entry
RCIX200 CDS
T00526
Symbol
rfbB-1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00521
Streptomycin biosynthesis
rci00523
Polyketide sugar unit biosynthesis
rci00525
Acarbose and validamycin biosynthesis
rci00541
Biosynthesis of various nucleotide sugars
rci01100
Metabolic pathways
rci01110
Biosynthesis of secondary metabolites
rci01250
Biosynthesis of nucleotide sugars
Module
rci_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RCIX200 (rfbB-1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RCIX200 (rfbB-1)
01055 Biosynthesis of vancomycin group antibiotics
RCIX200 (rfbB-1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RCIX200 (rfbB-1)
00525 Acarbose and validamycin biosynthesis
RCIX200 (rfbB-1)
Enzymes [BR:
rci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RCIX200 (rfbB-1)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CAJ35681
UniProt:
Q0W7G2
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All DBs
Position
2549661..2550623
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AA seq
320 aa
AA seq
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MMKNVLVTGGCGFIGSNFIRHMLEKHPNINILNLDKLTYAGNPDNLRDLEDHPCYGFVRG
DICDASIVNNVMKNVDTVVHFAAESHVDRSILDGDAFVTTNVLGTHTLLKAALEHKIKRF
IHVSTDEVYGSIMQGSFKETDILEPSSPYSASKAGSDLLALAYHNTYKLPVIVTRCTNNY
GPYQFPEKLIPLFVTNLMQGKRVPVYGTGKNIRDWLYVLDHCSAIDFILQNGTDGEIYNI
GGGEEKTNLEITRMILRLLEKDESMIEYVRDRPGHDFRYSLDISKLKRLGWSPSYRFEDA
LEATVKWYVDNRWWWEKLKR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaatgtactggttaccggcggctgcggcttcatcggcagcaacttcatccgc
cacatgctcgaaaaacacccgaatatcaacattttgaaccttgacaagctcacatatgca
ggcaaccctgacaacctccgtgatctcgaggaccatccctgctacgggttcgtgcggggc
gacatctgcgatgcctccatagtaaacaacgtcatgaagaacgtcgacactgtcgtccac
tttgcggcagaaagccacgtcgaccgctctatcctggatggtgacgcctttgtcactact
aacgtgctcggcacgcatactctcctgaaagcagcgctggaacataagattaagcgcttc
atccacgtgtccaccgatgaggtctacggcagcatcatgcagggctcgttcaaagagacc
gatatcctcgagccatccagcccgtactcggccagcaaagccggctcagacctcctggct
cttgcctatcacaacacttacaagctgcccgtgatcgtcacccggtgtaccaacaactac
gggccttaccagttcccggaaaagctgatccccctgtttgtcaccaacctgatgcagggc
aagagagtaccggtttacggcaccgggaagaacatccgggactggctgtacgttctcgac
cactgcagcgccatcgacttcatcctgcagaacggcaccgatggtgagatctacaatatc
ggcggcggggaagagaagactaacctggagatcactcgcatgatcctcaggcttctcgaa
aaagacgagagcatgatcgagtacgtcagagaccggcctggccacgacttccgctattcg
ctggacatctctaagctgaagaggctcgggtggtccccgtcctacaggttcgaggacgct
ctggaagccacagttaaatggtacgtcgataaccgctggtggtgggaaaaattaaaacgg
taa
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