Methanocella arvoryzae: RCIX2227
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Entry
RCIX2227 CDS
T00526
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rci03016
]
RCIX2227 (truA)
Enzymes [BR:
rci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RCIX2227 (truA)
Transfer RNA biogenesis [BR:
rci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RCIX2227 (truA)
Prokaryotic type
RCIX2227 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3613
Motif
Other DBs
NCBI-ProteinID:
CAJ37345
UniProt:
Q0W2P8
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All DBs
Position
899823..900623
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AA seq
266 aa
AA seq
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MKTALKIAYVGTNFYGSQAQPGLPTVESELRKALEEAGAIKLGTKIAMAGRTDAGVHALG
QVVAFEQADPKLTAPRIINSKLPKDLWAYARAEVPDDFDPRRHATSREYRYILYAPDVIE
RRLKECSSRFLGTHDFTNFSSVEAGKYPVRTVTRLDIAKRGDFYIIDIEADSFLWNMVRK
IVTALRLVGENKRPDGWIEKMFDPEYREGIPPAAPGGLYLSRVNYDGIAFEEDEYARQRA
YQRMLNSFEWHHTIAEIYKEFKDAMK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgaagactgcgctgaagatcgcctacgtcgggaccaatttttacggctcccaggcccag
ccaggcctgcccacggtggagagtgagctgagaaaagccctggaagaagcgggagcaatt
aaactcgggactaagatcgccatggcaggccggacagacgcgggcgttcacgccctcggg
caggtagtcgccttcgagcaggcggacccaaagctgaccgccccccgaattatcaattcg
aagctgcccaaagatctctgggcttacgccagggcagaagtacccgacgacttcgacccc
cggcggcacgccacaagccgggaatacagatatatattatatgcaccagacgtgatcgag
cgccgcctgaaggagtgctcgtcccggtttttgggcacccacgacttcaccaacttctcc
agcgtagaggccggcaagtacccggtcaggacagtcaccaggctcgacatcgcaaagcgg
ggcgacttttacatcatcgacatcgaggccgactcattcctgtggaacatggtgcgtaag
atcgtgacagcgctgcgcctcgtaggcgaaaacaagcggcccgacggctggatagagaag
atgttcgacccggagtaccgggaaggcataccgcccgccgcccccgggggactgtacctg
tccagagtcaattacgacggcatcgccttcgaagaggatgagtacgccagacagagagct
tatcaacggatgctcaactcgttcgagtggcatcatacgattgctgagatttataaagag
tttaaggatgcgatgaaatag
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