Methanocella arvoryzae: RCIX2247
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Entry
RCIX2247 CDS
T00526
Name
(GenBank) putative transcription regulator (AsnC/Lrp family)
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rci03000
]
RCIX2247
Transcription factors [BR:
rci03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RCIX2247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
DUF7343
HTH_20
HTH_11
HTH_DeoR
HTH_5
HTH_Mga
HTH_23
HTH_28
MarR
AsnC_trans_reg_3
CggR_N
AsnC_trans_reg2
Sigma70_r4
Fe_dep_repress
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAJ37363
UniProt:
Q0W2N0
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All DBs
Position
complement(883818..884396)
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AA seq
192 aa
AA seq
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MEIDRLNKRILQLLQRDGRITYKDITKEMDRAESTVRERISFMEEQGIIEGYTAIINKPR
VGLNCSAIVYARVQPTQFDEIANKLKLVNGVLQIYHTSGEKNLSFFITATDYDELNKIIK
NKITPLGINDMDISIIMKAIREIAEVNILSVDEKEAIVQARNKREMMPAPAQLKSSGMRV
GEALGVMYGHYK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggagatagacagactgaacaaacgtatattgcagttgcttcagcgtgacggcaggatc
acgtacaaagacattaccaaagaaatggaccgggcagagtcgactgtacgtgagcgcatc
agcttcatggaagagcaggggatcatcgaagggtatactgcgatcatcaacaaacctcgt
gtaggtctcaattgcagcgctatcgtctatgcccgagtgcagccgacgcagttcgacgag
atcgccaacaagctgaaactggttaacggcgtcctccagatttaccacaccagcggcgaa
aagaacctgtcattcttcatcacagccaccgattacgatgagctgaataaaattatcaag
aataagatcacaccgctgggcatcaacgacatggatatatcgatcatcatgaaggccatc
agggagatcgccgaggtcaacatcctgagcgtcgatgagaaagaggccatcgtgcaggcc
cgtaacaagagagagatgatgcccgccccggcccagcttaaatccagcgggatgagagtc
ggcgaggcgctgggcgttatgtatgggcattataaataa
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