Methanocella arvoryzae: RCIX2293
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Entry
RCIX2293 CDS
T00526
Symbol
pcn
Name
(GenBank) putative DNA polymerase sliding clamp (proliferating cell nuclear antigen)
KO
K04802
proliferating cell nuclear antigen
Organism
rci
Methanocella arvoryzae
Pathway
rci03030
DNA replication
rci03410
Base excision repair
rci03420
Nucleotide excision repair
rci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RCIX2293 (pcn)
03410 Base excision repair
RCIX2293 (pcn)
03420 Nucleotide excision repair
RCIX2293 (pcn)
03430 Mismatch repair
RCIX2293 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rci03032
]
RCIX2293 (pcn)
03400 DNA repair and recombination proteins [BR:
rci03400
]
RCIX2293 (pcn)
DNA replication proteins [BR:
rci03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
RCIX2293 (pcn)
DNA repair and recombination proteins [BR:
rci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
RCIX2293 (pcn)
MMR (mismatch excision repair)
Other MMR factors
RCIX2293 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
RCIX2293 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad9
Motif
Other DBs
NCBI-ProteinID:
CAJ37399
UniProt:
Q0W2J4
LinkDB
All DBs
Position
complement(840575..841315)
Genome browser
AA seq
246 aa
AA seq
DB search
MFKAAINAEVFKDAIEAVSTLVDEAKFRITKDSISARAVDPANVAMVAFDLNAKAFDTFE
ATDGEIGIDLVRFMDILGMTARDDRLELNLNEETRKLEIRTGGLAYTLSLLDPGSIRKEP
KVPALELPGKIVLNGAELKRAVKAAEKVSDHMALGVQDKTFYVEAEGDLDKVRLEIPESN
LISLQATSNVRSLFSLDYLNDIVKSLGKAEQVTIDLGTDYPVKFTFSIASGNGTVIYLLA
PRIESE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcggcaatcaatgcagaggtcttcaaggacgcgatcgaggccgtatcgacg
ctggtcgacgaggccaagttcaggatcacgaaggactccatctccgcacgtgcggttgat
cctgccaacgtcgccatggtggcattcgacctgaacgctaaggcgtttgacaccttcgag
gctaccgatggcgagataggcatagacctggtcaggttcatggacatcctcggcatgact
gccagggacgaccggctcgagctaaacctcaatgaagagacccgcaaactggagattcgc
acgggagggctcgcatatactctgtcgctgctcgaccccggctccatcaggaaagagccg
aaagtgccggctctcgaactgcccggaaagatcgtgctgaacggcgcagagctgaaaaga
gcagtcaaggctgcggaaaaggtatccgatcacatggccctgggcgtgcaggacaagacc
ttctacgtcgaggccgagggcgacctggacaaggtgcgcctggagatacctgaatcaaac
ctcatctctctgcaggcgacgagcaacgtaaggtccttattctcgctggactacctgaac
gacatcgtcaagtccctgggcaaggccgaacaggtaaccatcgacctcggcaccgactac
cctgtcaagttcactttcagcattgccagtggcaacggcactgtcatctacctgctggcg
ccgagaatcgagtctgagtaa
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integrated database retrieval system
