Methanocella arvoryzae: RCIX2575
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Entry
RCIX2575 CDS
T00526
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rci03016
]
RCIX2575 (truB)
Enzymes [BR:
rci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RCIX2575 (truB)
Transfer RNA biogenesis [BR:
rci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RCIX2575 (truB)
Prokaryotic type
RCIX2575 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
CAJ37633
UniProt:
Q0W1W0
LinkDB
All DBs
Position
complement(638259..639245)
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AA seq
328 aa
AA seq
DB search
MKLPGETKRERLIKSKDKAQGYGKDPQTRTIKELLDQGVINLDKPSGPTSHEVVSWVKNI
LEIRRAGHSGTLDPHVTGVLPTMLGDATRLVQTLLLSGKEYACVMRLHDDVPEKKLRAVM
DEFVGVIYQRPPLVSAVKRQVRKRSIYYIEFLEQDGRDVLFIVGCEAGTYIRKLCHDIGE
AIGCGAHMYELRRTRSGPFAEDDSLITLHMLKDAYTIYKETGDEKPLRKCIYPMEYALRH
LPKIIVKDSAVDALARGASLHAQGISQLETGINKGDMVAVFTHMGEVVSIGRAKMTTDEL
MSAKEGQALDTVAVVMKPGIYPSAWKKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaccgggcgagacgaagcgggaacggctgatcaagtcgaaagacaaagcacag
ggctacggcaaggacccgcagacccgcaccatcaaagagctgctggaccagggcgtcatc
aacctcgacaagccctccggccccaccagccacgaagtggtctcctgggtcaagaatatc
ctggagatcaggcgggctggccacagcggcactcttgatcctcacgtaaccggcgtgctc
ccgaccatgctcggtgatgccacccggctggtacagaccttactcttatcaggcaaggaa
tatgcctgcgtcatgcgcctccacgatgacgtgccggagaaaaagctccgggcggtcatg
gacgagttcgtcggcgtaatttatcagcgcccgcccctcgtcagcgcggtcaagagacag
gtccgcaagcggagcatctactatatcgagttcctggagcaggacggccgggacgtgctc
ttcatagttggctgtgaggccggcacctacattagaaagctctgccacgatataggcgag
gcaatcggctgcggcgcccacatgtatgagttgcgcaggacccggagcggcccgttcgcc
gaggacgactccctgatcacgctgcacatgctcaaggatgcttataccatctacaaggag
actggcgacgagaagcccctccgcaagtgcatctacccgatggagtacgcgctgcggcac
ctgccgaagatcatcgtcaaggacagcgcagtcgacgcccttgcaaggggcgcatcgctc
cacgcccagggcatcagccagcttgaaacaggcatcaacaagggcgacatggtcgccgta
ttcacccacatgggcgaagttgtctcgatcggcagggctaagatgacgacagacgagctc
atgagcgcaaaagaaggacaggctcttgacaccgtcgcagtggtcatgaagccgggcata
tacccgtcagcgtggaagaagaaataa
DBGET
integrated database retrieval system
