Methanocella arvoryzae: RCIX2741
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Entry
RCIX2741 CDS
T00526
Name
(GenBank) putative phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rci
Methanocella arvoryzae
Pathway
rci03410
Base excision repair
rci03430
Mismatch repair
rci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCIX2741
03430 Mismatch repair
RCIX2741
03440 Homologous recombination
RCIX2741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rci03400
]
RCIX2741
DNA repair and recombination proteins [BR:
rci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RCIX2741
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RCIX2741
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RCIX2741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
CAJ37781
UniProt:
Q0W1G2
LinkDB
All DBs
Position
complement(506264..507241)
Genome browser
AA seq
325 aa
AA seq
DB search
MTMTTLILTHADSDGICSGALAVAASEDPTVFFTSPVSVIDDAEEAEEYDRVIICDIAIN
ISTSGALRKRMNELAAKRELIYIDHHPLPEGFSAPWLVHDQDACGSLLTYWQFKDKLSPD
MSRVAMYGAIADFRDNTPLAKELVTRWDKRSLYYHSGTLSQGIEIDRKNFDSKRDLVFRL
SKNIIPSDIDGLVKKAVTASRLEEGLRTRVAQSVVRLNNLSYVVDAAGFISKAAIYARIY
GNTPVGISAELRPSHHMYDLSVRAEDGIDLNRLLNDSAVKFGGHGGGHPQAGGGRIPEHR
LNDFLADLDAAIGRAISEKRTTAEI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacgacactcattctgacccatgccgattccgatggtatttgcagcggggcg
ctggcggtggcggcaagcgaagatcccacagtcttttttaccagccccgtctccgtgatc
gacgatgccgaggaagctgaagaatatgaccgggtcatcatttgcgacattgcgatcaac
atctcgacttccggggcgctaaggaaaagaatgaacgagttagccgcaaagcgggaactg
atctacatcgatcaccacccgctgcccgaaggcttcagcgcgccatggctcgtccacgat
caggatgcctgcggctcactgcttacctactggcagtttaaggataagctgagccctgac
atgagcagggtggccatgtacggagcaatcgctgacttccgggataatactcctctggct
aaggagcttgtcacccggtgggataagcgaagcctgtactaccattcgggcaccctgtcc
cagggcatcgagatcgaccgcaaaaatttcgacagcaaacgagacctggtgttcaggctg
tcgaaaaacatcattccgtcagacatcgacggcctggtgaaaaaagcggtcaccgcttcc
cgccttgaggagggcctgcgaaccagggtggcgcagagcgtcgtcaggctgaataaccta
tcctatgtggtggacgcagccgggttcatatctaaggcagctatctatgcccgcatctac
ggaaataccccggtgggaatatctgctgaactcaggccgtcacatcacatgtacgacctc
agtgtcagagcggaagacggtatcgacctgaaccggctcctcaacgactccgccgtcaaa
ttcggcggccacggcggcggccacccccaggccggagggggacgcataccggagcacagg
ctaaatgacttcctcgccgacttagatgcggccataggacgggcgattagtgaaaaaaga
accactgcagagatatag
DBGET
integrated database retrieval system