Methanocella arvoryzae: RCIX370
Help
Entry
RCIX370 CDS
T00526
Name
(GenBank) hypothetical protein
KO
K13735
adhesin/invasin
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
RCIX370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_1
VWA
Invasin_D3
MG4
VWA_2
CarboxypepD_reg
DUF4198
VWA_3
Big_13
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
CAJ35814
UniProt:
Q0W729
LinkDB
All DBs
Position
complement(2399981..2403913)
Genome browser
AA seq
1310 aa
AA seq
DB search
MFKQSFYYRGSGCYMTRLCRHTVLAMAIAIITCIVAGSTLTYAGEVGSPTLIVTTPAKMT
AGTTAIADVYLVDSNKPVAGAVITLTYAGAGISGPTSVTTDPTGHARVQITAGPGAGTAS
LTATYSTYSATKEISVAGLPASLLILPKSTLLNADGTRSYKLEVLVKDASGTPCNATPVG
VTIDGTKVTLYTGEDGIARKEIGPRTDSHIYSITAEANGLSESAQVRFIALNLEFPDFSP
EMTVGSEVPFTVILLDGTTPVAGVPLTFVVQSPENLATPSAYSAVTDDDGMVVFNFRLST
KVGNNRVVISNPELGYPGSGVITYKAIKGNGGSLSKIELEAVPMPGTPVLANNSDYYKIK
VWAKDANNNTVCNVVLDVDKDGEETPYSVTTNSNGYAEFILPPSLYMGSVLLEVKSTDGS
VTEHITLTYDCGRPEKIVLKAQPNVIASAEVMTPAGMEDVHATSVIAQVTDKWGHPIEGE
TVTFESMNTLLGTITGPETVVTDANGEAESTFLLSADAKGKGEVKIKATSGSLPPAYFTI
VYTNATFISIDTELTTSGTAGVVELEKNPYITVDITLKGLGWQNRAKPSDVMLVMDRSGS
MAWNAGMVFPDPASGSPQKGVLARNSRSTFNSEVDAYNNANKFWDGIVGSSKWKLLYTYS
NSQSTPLTIELNSPSNRYYGINGNYYFLMVIDPDGKTYVAGKNYDGVSSSHKTYQNTLTI
NSPKNGNYRIYGLLIKGYTGSGSTTTYSLKIRSQTITNSGSQPSSYYSSYQSAYNYADSM
YDDNWGIYNNTRWEHIATYHNSDERNIQIMLSSPYTNYDNGEYYNLMVIAPDGRAYVSNP
KKGYSGSVSSSQSSNENYVWFTDEMAIDGKYEIYGIQFATGTDEDATYSLMVLKPPLRLG
SKLTTDSVAKTSAVSFVESRGDGDQVGVVSFYTSASLNSALKQMNSGTNKTTVKNAINSL
SASGGTDISSGIKKAIAELDAHKRSTAKQYIIVLTDGYSQYPEFDLIEADKAKAKGYTIF
TIGMGMADEDTLKKIASKPEYYYRVLSPEQLEAAYYDIGQEIGGVIAADSTMEIISDRSE
VNGVIVNNTEYVMDSAIVTHTNGILERPVNPLIRTIGDKYHLTWNPGIIKLNEVWKVHYT
LKINANGTVAPITPESYVEFIREDSNESERAWFVGDTIYSIGTISGNLTNATLPLYVEID
DTVIKNNDTISRQKQPIKWTVNYSNAGFYTQRITIEGNGEKIVIALPDSMYRGDINSTGS
YVYLWDAGLLQDAAYTVTVEAKENNGNVHSDSVTVFVDRRMGSIRIADFR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaagcaatcattctattatcgggggagcggttgctatatgaccaggctctgcagg
cacactgtattagctatggctatcgccataatcacatgtatcgttgctggaagcacgcta
acatacgcaggagaagtcggttcgccgacgttgatcgtcactactcctgcgaagatgact
gccgggacgacagccattgcagacgtttacctggtcgatagcaacaaaccggttgcggga
gctgttatcactctgacgtatgctggagcaggtatctccggcccgacatctgtgacgact
gatccgacgggtcacgccagggtacagattacagcgggacccggagcaggaactgcatcg
ctaactgcgacttattcgacgtattcggcgacaaaggagatctcggtcgccgggctgcct
gcgtcgttattaattttgccgaagtccacgctcctcaacgcagacggtacccggtcgtac
aaactggaagtcctggtgaaagatgcctccggcaccccgtgcaatgctacgcctgtcggc
gtgacaatagatggtacgaaagtaacattgtataccggtgaggacggcattgccagaaaa
gagatcggccctcgcaccgactctcacatttacagcattacggcagaggctaacggcctg
tcagagtcggctcaggtcaggtttatcgcattaaacttagaatttccggacttttcaccc
gagatgacggttggcagcgaagtaccatttacggtgattcttctggacgggacaacaccg
gtcgcaggtgtccccctgacatttgtagtccagtcaccagaaaacctggccacgccctct
gcgtactcggcagtaactgacgacgatggcatggtcgtattcaacttcaggctcagcact
aaagtaggtaacaacagggtagtgattagcaatccggagctgggctatcccggctcgggg
gtcatcacctacaaggccatcaagggtaacggcggaagccttagcaagatagaactagag
gcggtaccgatgccggggactcccgtgctggcaaataacagtgactactacaagataaag
gtctgggcaaaggacgcgaacaacaacacggtctgcaacgtggtccttgacgttgacaag
gacggcgaagagacgccctattcggtcacaaccaactcaaacggctacgcggagttcatc
ctgccaccttcgctgtatatgggaagcgtgctcctggaagtcaagtctacagacgggtcc
gtcaccgagcacatcacgctaacatacgactgcggccggccggaaaaaatcgtgctcaaa
gcccagcccaacgtgatagccagcgcggaggttatgacaccggcaggcatggaagatgtc
cacgctacatccgtgatagcgcaggtgactgataagtggggccaccccatcgaaggggag
acggtcacattcgagtcgatgaatactctgctgggcacgatcacaggccctgagacggtc
gttaccgatgccaacggcgaagctgagtcgaccttcctcctgagcgctgatgcgaaaggc
aaaggcgaggttaagatcaaggctacgagcggctcacttcccccggcgtatttcacgatt
gtatacacaaatgccactttcatcagtattgacacggaattgacaacgagcggaactgcc
ggggtcgtagagctggaaaagaacccgtacatcacggtggatatcacgctgaaagggctc
ggctggcaaaaccgggccaagccttcggatgtaatgctggtcatggacaggtccgggagc
atggcctggaatgccgggatggtcttccccgacccggcttccggaagcccgcaaaaaggc
gttctggccaggaacagcaggagtacattcaacagcgaagttgacgcgtacaacaatgca
aacaagttctgggacgggatcgtgggaagcagcaagtggaaactgctctatacctacagc
aatagccagagtacgccgctgaccatagagctcaactcgcccagcaacaggtactatggc
ataaatggcaactactatttccttatggtaatagaccctgatgggaaaacctatgtggcc
gggaaaaactacgatggggttagtagcagccacaaaacgtaccagaatacactgacaatc
aacagcccgaagaatggtaactacaggatttatggcttgcttatcaagggttatacaggc
agtggctcgacgacgacgtacagcctgaagatcaggtcccagacgatcacgaacagcggg
tcccagccatcttcctattactccagttatcaaagcgcatacaattatgctgattcgatg
tacgatgacaactggggcatatacaacaacacccgctgggaacatattgcgacataccac
aacagcgatgaaagaaacatccagatcatgctctcatcgccgtatacgaactacgataac
ggcgaatactataatttgatggtgatcgcaccagacggcagagcttacgtttcaaatccg
aaaaagggctactcgggaagcgtatcctcttcgcagagcagcaacgagaattacgtctgg
tttactgacgagatggcgatagatggcaaatacgagatttacggaatccagtttgctact
ggcacagatgaggatgcaacgtatagcctgatggtcctgaagccgcctctcaggcttggc
tcgaaactcacgacagatagtgttgccaagacgtcggccgtaagtttcgtggagagcaga
ggagatggagaccaggtgggcgtcgtatccttctacacttcggccagcctgaattcggcg
ctgaaacagatgaactcaggaactaacaaaacgacggttaaaaatgcaattaacagttta
agcgccagcggtggcacggacatctcctctggtatcaagaaagcgatcgcagaactggac
gctcacaagagaagtactgccaagcagtacatcatcgtcctgacggacggctactcccag
taccctgagttcgacctcatcgaggctgacaaagccaaggctaaaggctataccatcttc
acgataggcatgggcatggccgatgaggatacgctcaagaagatagccagcaagcccgaa
tactactacagggtgctgagcccggagcagctggaagccgcttactacgatatcggccag
gagatcggcggcgtcatcgctgccgattcgacgatggagatcatatcggacagaagcgaa
gtgaacggcgtgatcgtcaacaacaccgaatacgtcatggatagcgcgattgtcacccac
accaacggaattctcgagcggccagtcaatccgctaatcaggaccatcggcgataaatat
caccttacgtggaaccccggcatcatcaagctcaatgaggtatggaaggtacactatacg
ctcaagattaatgccaacggtacagttgcgcccattaccccggaaagttacgtggagttt
atccgggaagattctaacgagtctgaaagagcgtggttcgtcggcgatacgatttactcg
attggtacgatcagcggtaacctcaccaacgctacgctacccctgtacgtggaaatagat
gatacggtcatcaagaacaatgacacgatttccaggcaaaagcaaccgatcaagtggacg
gtgaactattcaaacgcaggcttctacacccagaggatcacgatcgaaggtaacggagaa
aagatcgtcatcgccctgccggattcgatgtataggggcgacattaacagcactggcagc
tacgtgtacctgtgggatgccggactgctgcaggacgccgcttacacggtgacagtcgag
gctaaggaaaacaatggaaacgtccattcagattctgtaacggtgtttgttgaccgcaga
atgggcagtatcaggattgcagatttcaggtga
DBGET
integrated database retrieval system
