Methanocella arvoryzae: RCIX58
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Entry
RCIX58 CDS
T00526
Symbol
gyrA
Name
(GenBank) type II DNA topoisomerase II (gyrase), subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rci03032
]
RCIX58 (gyrA)
03400 DNA repair and recombination proteins [BR:
rci03400
]
RCIX58 (gyrA)
Enzymes [BR:
rci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RCIX58 (gyrA)
DNA replication proteins [BR:
rci03032
]
Prokaryotic type
DNA Topoisomerases
RCIX58 (gyrA)
DNA repair and recombination proteins [BR:
rci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RCIX58 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
WDR55
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-ProteinID:
CAJ35569
UniProt:
Q0W7S4
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All DBs
Position
2664103..2666583
Genome browser
AA seq
826 aa
AA seq
DB search
MADEKQPQPQSPQQQQTQETLLPVQIEEEMKRSYIDYAMSVIVGRALPDVRDGLKPVHRR
CLYGMYELGNTHDKPYKKSARVVGDVMGKYHPHGDAAIYDTIVRMAQDFSLRYTLVDGQG
NFGSIDGDGAAAMRYTEVRLERIAEEILADLDKETVDFAPNFDETLKEPVVLPARLPNLL
INGSSGIAVGMATNIPPHNLGEIVDGTIAVIDNPEIEPIELLNYVKGPDFPTAGFIYGKE
GIKEAYLTGRGSIRMRAKAEIVDENGKMSIIVTEIPYMVNKARLIESIADLVKDKKIEGI
SDLRDESDRDGMRIVIELKKAANANVILNQLFKHTQMESTFGVNNIALVDNTPMTLSLKE
TIGYFIKHRQEVVTRRSQFELKKAQAREHILAGLLIALTNIDDFVRIIRGSANADEAKAT
LMEKYGLSDEQSRAILDMRLARLTALERQKIDDERADLIKEIAHLNEVLASPQMVLDIIK
AELLDMKAKYGDERRTKIVESAGEIVDEDLIPVENVVVTISNTGYIKRMPVDTYRTQRRG
GVGIVGMETKEEDFVVDLFVASTHDNILFFSNKGKVYSLKVYEIPPAASRQARGKAIINL
INIEPGEAINAMIPIKTFDDQHFLVMCTREGTIKKTALSAFQNIRSTGIIAIGLESGDEL
ISVKMTNGSQEVLIATRNGKCNRFSESEVRTMGRPAMGVIGIRLTENDKVIAMEIVSPGQ
SVLTICENGFGKRTPIEEYTAHHRGGQGMINIKTTLRNGAVVAVISVMPDDQIVIASKEG
MMTRMNVTDIPEIGRNTQGVRVMKMRPEDSVVAVARLVSEKKEDEI
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaaaaacaaccccaaccacaatcacctcagcaacagcaaactcaggaaact
ttactgcccgtccagatcgaggaggagatgaaacgctcctacatcgattacgcgatgagc
gtcatcgtagggagagctctccctgacgtccgggacggccttaagcctgtgcatcgcagg
tgcctttacggcatgtacgagctgggcaacacccacgacaagccctacaagaagtccgcg
agagtagtgggcgacgtcatgggtaagtaccacccccacggcgacgcggcgatctatgat
actatagtcaggatggcgcaggacttctccttgcgctacacgctggtcgacggccagggc
aacttcggcagcatcgacggcgacggggctgcggccatgcgttacaccgaagtccggctg
gagcggatcgccgaagagatcctcgccgacctcgacaaggaaaccgtagatttcgccccc
aacttcgacgaaaccctgaaagagcctgtcgtcttacctgccaggctgcccaacctgctg
atcaacggctcgtccggtattgcggtaggcatggcgaccaacatcccgccccataacctg
ggcgagatcgtggacggcaccatcgcagtcatcgacaacccggagatcgagccgatcgag
ctgctcaactacgtgaaaggcccggacttcccgaccgccggcttcatctacggcaaggaa
ggcatcaaggaggcctacctcacgggcaggggcagcatcaggatgcgggcgaaggccgag
atcgtggacgagaacggcaagatgtccatcatcgtcaccgagatcccctacatggtcaac
aaggcgaggctcatcgaaagcatcgcagatctggtcaaagacaagaagatcgagggcatc
tctgacctgagagacgagtctgaccgggacggcatgcgcatcgtcatcgagctcaagaag
gccgccaacgcgaacgtcatcctgaaccagctgttcaagcacacccagatggagtcgacc
ttcggcgtgaacaacatcgccctcgtcgacaacaccccgatgacgctgagcctgaaggag
acgatcggctacttcatcaagcacaggcaggaagtagtcaccaggcgcagccagttcgaa
ttaaagaaagcacaggccagagagcacatcctggccggcctgctgatagcgctgaccaac
atcgacgacttcgtccggatcatcaggggctccgccaacgccgacgaagcgaaggccacc
ctcatggagaagtacggcctgtccgacgagcagtccagggccatcctcgacatgcggctg
gcgaggctgactgcgctggagcggcagaagatcgacgatgagcgggcagacctgattaag
gagatcgcacacctcaacgaagtgctggccagcccccagatggtgctggacatcatcaag
gccgagctgctggatatgaaagcaaagtacggcgacgagcggaggaccaagatcgtggag
tctgccggcgagattgtggacgaggacctcatcccggtcgagaacgtggtcgtcaccatc
tccaacaccggctacatcaagaggatgcctgtcgacacctaccggacccagcgccggggc
ggcgtcggcatcgtcggcatggagaccaaggaagaggactttgtcgtcgacttattcgtg
gcctcgacgcacgacaacatcctgttcttctcgaacaagggcaaagtctattcgctcaag
gtctacgagatcccgccggcagccagccgacaggcaaggggcaaggcgatcatcaatctg
atcaacatcgagcccggcgaggccatcaacgccatgatcccgatcaagacctttgacgac
cagcacttcctggtcatgtgcaccagggaaggcaccatcaagaagaccgccctgtcggcg
ttccagaacatccggtccacgggcattatcgccatcggcctcgaaagcggggatgagctg
atctcggtcaagatgacgaacggcagccaggaagtcctgatcgcgaccaggaacggcaag
tgcaaccggttctccgaaagcgaggtccggaccatgggcaggcctgccatgggcgtgatc
ggtatccgcctgacagagaacgacaaagtcattgccatggaaatcgtcagccccggccag
tcggtcctgaccatctgcgagaacgggttcggcaagcgcacccccatcgaggagtacacc
gcccaccaccggggcggccagggcatgatcaacatcaagaccactctgcgaaacggtgct
gttgtggccgttatcagcgtcatgccggacgaccagatcgtcatcgccagcaaggagggc
atgatgacgaggatgaacgtcaccgacattcctgaaataggcaggaacactcagggcgtc
cgggtcatgaagatgaggccggaggactcggtcgtggcggtcgcccggctcgtgtcggag
aagaaagaagacgagatctaa
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