Methanocella arvoryzae: RCIX607
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Entry
RCIX607 CDS
T00526
Symbol
fen
Name
(GenBank) flap structure-specific endonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
rci
Methanocella arvoryzae
Pathway
rci03030
DNA replication
rci03410
Base excision repair
rci03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RCIX607 (fen)
03410 Base excision repair
RCIX607 (fen)
03450 Non-homologous end-joining
RCIX607 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rci03032
]
RCIX607 (fen)
03400 DNA repair and recombination proteins [BR:
rci03400
]
RCIX607 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rci04147
]
RCIX607 (fen)
DNA replication proteins [BR:
rci03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
RCIX607 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
RCIX607 (fen)
DNA repair and recombination proteins [BR:
rci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
RCIX607 (fen)
Exosome [BR:
rci04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RCIX607 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CAJ36013
UniProt:
Q0W6I0
LinkDB
All DBs
Position
2199939..2200961
Genome browser
AA seq
340 aa
AA seq
DB search
MGVDLGGLVEPREIELKELNNRTVAVDAYNTLYQFLSIIRQQDGAPLADDRGNVTSHLSG
IIYRVTNLVEEGMKPVFVFDGKPPSFKAETIKARAEVREAARQMYEAAKAAGSAEAYKYA
QASTSINRQIVDDAKVLLGYMGIPFIVAPSEGEAQAAYMVSRGAADYVGSQDYDSLLFGA
PRVVRNIAITGKRKVPRKNIYMDVKPEVIELQEVLATLGLTREELIDMAILVGTDYNPGI
FKVGPKTALKLVKKHGDNMPAILDELGQTIENWEAIKEFFLHPTVTDDYQVKWGKPEPAK
IKEFLCEEHSFSVDRVDKVLERLTTAVSETTKQKTLSSWF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgatttgggcggccttgtggagccgagggagatcgagctgaaagagctgaat
aaccgcacggtggcggtcgacgcctataatacgctctaccagtttttaagcatcatccgc
cagcaggacggggctccgctcgcggatgaccggggtaatgtaacgtctcacctatcgggc
atcatctaccgtgtgactaaccttgtcgaggagggcatgaagccggtcttcgtgttcgac
gggaagcccccgtcgttcaaggcggagacgatcaaggcccgggcggaggtacgggaggcg
gcgaggcagatgtacgaggcggcgaaggctgccggaagtgcggaggcctataaatacgcg
caggcttctaccagcatcaaccggcagatcgtggacgacgcgaaagtccttttgggctat
atgggcattccctttatagtggctccctccgagggcgaggctcaggccgcttacatggtc
tccaggggcgccgcggactacgtgggctcccaggattacgattccctcctgttcggagcg
ccccgggtcgtcaggaacatcgccatcacgggcaagcggaaggtgcccaggaaaaatatc
tacatggatgtcaagccggaggttatcgagcttcaggaagtgctcgccactctcggcctc
acccgtgaggaactgatcgacatggccatcctcgtcggcacggactataatcccggcatc
ttcaaggtcgggcccaagactgcccttaagctcgtgaaaaagcacggtgacaatatgccc
gcaatcctggatgagctgggccagaccatcgagaactgggaggccataaaagagttcttc
ctgcacccgacagtgaccgacgactatcaggtgaagtggggcaagcccgagccggcgaag
ataaaagagttcctgtgcgaggagcacagcttctcggtcgaccgggtcgacaaagtgctc
gaaaggctgactaccgctgtatcagagactacaaagcaaaagaccctgtcatcgtggttc
tga
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