Methanocella arvoryzae: RCIX684
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Entry
RCIX684 CDS
T00526
Name
(GenBank) putative transcription regulator (ArsR family)
KO
K07721
ArsR family transcriptional regulator
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rci03000
]
RCIX684
Transcription factors [BR:
rci03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
RCIX684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_Cmi2_C
TrmB
HTH_20
MarR_2
MarR
HTH_24
Rrf2
PF0610-like_N
HTH_11
Fe_dep_repress
WHD_DprA
TFIIE_alpha
HTH_PafC
LexA_DNA_bind
DUF2250
HVO_A0261_N
DUF7342
FeoC
GntR
HxlR
HTH_IclR
PH0730-like_N
HTH_27
HTH_9
HVO_A0114
PadR
HTH_69
DUF4423
DUF742
Sigma70_r4_2
NirdL-like_HTH
HTH_34
GerE
HTH_AsnC-type
IF2_N
ArsR
HTH_36
DUF2513
FUR
Sulfolobus_pRN
DDRGK
CggR_N
Motif
Other DBs
NCBI-ProteinID:
CAJ36076
UniProt:
Q0W6B7
LinkDB
All DBs
Position
complement(2133804..2134460)
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AA seq
218 aa
AA seq
DB search
MDMSYLLDILGNENRRNILTLLSYRPCYVTEISEELKVSPKAIIDHLKILEEAGLVESYH
DQQGRKYYEIANNVRIEVAISPISFQVEVTRVETGEAEQKTLRDRFGESRISEDLAGSLK
YLCEEVRRLNETSLQLRETQRSVQAMLSEVTGMCIEIINEVASDQIEAEVLYLLVRGPAG
FEDIAEKLHIPQTVVRAELARLMKKGLVRYKSGLWSIE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtcatacctgctagatattctggggaacgagaaccgccggaatatcctgacg
ctgctctcgtaccgcccgtgctacgtgacggagatctccgaggagctgaaagtctccccc
aaggccatcatcgaccacctcaagatcctggaggaggcggggctcgtggagagctaccac
gaccagcaggggcggaagtactacgagatcgccaacaacgtcaggatagaggtggcgatc
tccccgatcagcttccaggtcgaggtcacccgggtggagaccggagaggccgagcagaaa
acgctccgggaccgcttcggggagagccggatcagcgaggatctggccggctcgctcaag
tacctctgtgaggaagtgcgacggctcaacgagacaagcctccagctgcgagaaacccag
aggtcagtgcaggccatgctgtcggaagtcacgggcatgtgcatagagatcatcaacgag
gtcgcctctgaccagatcgaggcagaggtgctctacctgctggtacgcggccccgccggc
ttcgaggacatagccgagaagctgcacatccctcagaccgtcgtccgggcggagctggcc
aggctgatgaaaaaggggctcgtgagatacaagtcgggcttatggagcatagaatag
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