KEGG   Methanocella arvoryzae: RCIX869
Entry
RCIX869           CDS       T00526                                 
Name
(GenBank) Lhr-like RNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rci  Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:rci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rci03400]
    RCIX869
Enzymes [BR:rci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RCIX869
    5.6.2.6  RNA 3'-5' helicase
     RCIX869
DNA repair and recombination proteins [BR:rci03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RCIX869
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr Helicase_C ResIII Cas3-like_C_2 AAA_19 Med4
Other DBs
NCBI-ProteinID: CAJ36228
UniProt: Q0W5W5
LinkDB
Position
complement(1978446..1981103)
AA seq 885 aa
MTAKRKRKTYTPPSSVSYATLDHTDEEILSLFEPSVRQWWTETFGPKKQVNNGYFTPPQR
LAIPLIHQGKNVLICSPTGSGKTLSSFTAIINELFLLASSEGLENSVYCIYISPLKSLAN
DIHKNLEQPLDQISKLYGDEKLIRAAIRHGDTASDERSSMLRKTPHILNTTPETLAILLN
SPRFVEKLATVRWVIIDEIHSMADTKRGVFLSLALERLEEVVRKPFVRIGCSATVEPLDK
IGEFLAGCENGIPRDVTVVDTRFVREFDLKLLCPVPNLIEASAQEVNHALYEMIHGMIQE
NTNTLVFTNTRSGAERILYHLRKEYPDYYNEENSGCHHGSLSKGGRLDIEDKLKAGTLKV
ATSSTSLELGIDMPYLDLVIQVGSPKSVSALLQRVGRAGHSLGQVVKGRVIALDRDELIE
CAVMLKKAQDGFIDGVNIPENCLDVLIQHVFGMAINEPMELERVKKIVRRSYCYRNLSDE
DFDEVIKYLAGSLPGMEDRSIYGKIWHDPETGKIGRRGKLARMIYYTNIGTIPDEFSCDV
ITRSDQKWVGKLDEQYLEKLQKGDVFVLGGKFFEFQYRRGSKVYVDPSHSRPTVPSWFSE
RLPLSFDLALHILDFRDMMARRVGDRSTRKWLLNTYPLDENSAESIYQIFDEQIRYKGEN
SISTRKKFVIEEHLDKPHFRRYYYFQSNYGRPFNDGLSRVLAYIVSRQRTSNVTLSVSDS
GFFISVPLSKKLDLLDYIESLDETKVKDLLRLSLEESQLLKRMFRINATRSLMILRNYKG
HQKSAKRQQVSADMMLSYAHKLDNFAVLEEAYREIIEDKLEIAHIQQIIRGIKDGEIEVE
LIPVETPSPLSFGIASLSASDVVLAEDKNSLLKEFHQRVMEKIKA
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgacagcgaagagaaagagaaaaacgtatacgccgccctcttccgtgagctacgccacg
ctcgatcacacggacgaggagatactcagcctgttcgagccgtcggtccgccagtggtgg
acggagaccttcggcccgaaaaagcaggtcaacaacggctattttacccctccccagcgg
ctcgccatccccctcatccaccagggcaaaaacgtcctcatctgcagccccacgggctca
ggtaagaccctgtcctcgttcaccgccatcatcaacgagctgttcctgctcgccagctct
gaagggcttgagaacagtgtctactgcatctacatttcaccgctcaagtcgctcgccaac
gacatccacaagaacctggagcagcctctggaccagattagcaagctgtacggcgacgag
aagctgatccgggccgccatccggcacggggacaccgccagcgacgagcgctcctccatg
ctgcgcaagacgccccacatcctgaacaccacgcccgagacgctggccatcctcctcaac
tctcccaggttcgtggagaagctggcgacggtccggtgggtgatcatcgacgagatccac
tccatggccgacaccaagagaggcgtcttcctctcgctcgccctggagaggctggaagaa
gtggtcagaaagccgttcgtccgcatcggctgcagcgccacagtggagccgctggataaa
attggagagtttctggccgggtgcgaaaatggcatacccagggacgtcacggtggtagac
acacgcttcgtcagagaatttgacctaaagctgttatgccctgtacccaacctgatcgag
gcttccgcccaggaggtcaaccacgccctgtacgagatgatccacgggatgatccaggag
aacaccaacaccctcgtcttcaccaacacgaggagcggggcggagcgcatcctgtaccac
ctgcgcaaggagtaccccgactattacaacgaggagaactcaggctgccaccacggttcc
ctctccaagggaggccgcctcgacatcgaggacaagctgaaggcgggcaccctcaaggtc
gccacgtcatcgacttcgctggagctgggcatcgacatgccgtacctcgatctcgtgatc
caggtgggctccccgaagtcggtctccgcgctgctccagagggtcggcagggccggccac
agcctgggccaggtcgtcaagggccgggtcatcgcgctggaccgggacgaactgatcgag
tgcgccgtcatgctcaagaaggcgcaggacggcttcatcgacggcgtcaacatcccggag
aactgtttagacgtcttaatccagcacgtgttcggcatggccatcaacgagcccatggag
ctggagagggtcaagaagatcgtccgccggagctactgctaccggaacctgagcgacgag
gacttcgacgaggtcatcaagtacctggcgggaagtttgccgggcatggaggaccggagc
atctacggcaagatctggcacgacccggagacgggaaagatcggccggagggggaagctc
gcccggatgatttattatactaatatcggcaccatccccgacgagttctcctgcgacgtc
atcacgagaagcgaccagaagtgggtgggcaagctcgacgagcagtatctggagaaactg
cagaagggcgacgtgttcgtgctgggcggcaagttcttcgagttccagtaccgccggggc
agcaaggtctacgtcgacccgtcccacagccggcccactgtcccgtcgtggttctcggag
aggctgccgctgtccttcgacctggcgctccacatcctcgacttccgggacatgatggcc
cgcagagtgggggaccgcagcacccgcaagtggctgttaaatacatatccgctggacgag
aacagcgcggagagcatctaccagatcttcgacgagcagatccggtacaaaggcgagaac
tctatctccacgaggaaaaagttcgtcatcgaggaacatttagacaagcctcacttccgc
cggtactactacttccagtccaactacggcaggccgttcaacgacggcctcagcagagta
ttagcctatatcgtttcccgccagcgcaccagcaacgtgaccctgtcggtcagcgacagc
ggtttcttcatctcggtgccgctgtccaaaaagctggacctgctggactacatcgagtcg
ctggacgagaccaaggtcaaagacttactaagactatcgctcgaggaatctcagctgctg
aagcgcatgttcaggatcaatgcgaccagatcgctcatgatcctcaggaactacaagggc
caccagaagagcgccaagcgccagcaggtatcggcagacatgatgctgtcgtacgcgcac
aagctggacaacttcgcggtgctcgaagaggcctaccgggagatcatcgaggacaagctg
gagatagcccacatccagcagatcatccggggcatcaaggacggggagatagaggtcgag
ctgatcccggtggaaaccccgagcccgctcagcttcggcatcgcctcgctgtcggcctcg
gacgtggtgctcgcagaggacaagaactcgctgctgaaagaattccaccagcgggtcatg
gagaaaatcaaggcatga

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