Methanocella arvoryzae: RCIX896
Help
Entry
RCIX896 CDS
T00526
Symbol
pol2b
Name
(GenBank) DNA-directed DNA polymerase D, large subunit
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
rci
Methanocella arvoryzae
Pathway
rci03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RCIX896 (pol2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rci03032
]
RCIX896 (pol2b)
Enzymes [BR:
rci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RCIX896 (pol2b)
DNA replication proteins [BR:
rci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
RCIX896 (pol2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PolC_DP2_central
PolC_DP2_cat
PolC_DP2_N
zf-DPOE
Motif
Other DBs
NCBI-ProteinID:
CAJ36247
UniProt:
Q0W5U6
LinkDB
All DBs
Position
1957926..1961330
Genome browser
AA seq
1134 aa
AA seq
DB search
MPPKTSEAQEAYFKKLEAEFLHCREIATAARRKGYDPSLEVEIPSATDLADRVEVIMGVP
GLAAHIRKCEEKMSREEASLQVAADIAEGLVGKFKDEEEAVQCAVRTAVAVLTEGVVAAP
LEGISAVKLAKNDDGTEYIKVYFAGPIRSAGGTAEALAVLAADYVRRKTGRAPYKIRDVE
VERFVEEIMLYKSIAHLQYTPTDEEIRLIVRNCPVCIDGEPTEQEEVQGYRNLERVETNR
VRGGIALVIAEGIILKAPKVKKHVDKLKFDGWEWLDKIIAGSKPAGGENKEEEKKIKPKD
KFLADLIAGRPVFGHPSRAGGFRLRYGRSRNTGFATAGIHPASMTIMDDFIATGTQLKVE
RPGKAAAMVPVDSLEGPTVRLFNGDVVRISDEKTALKVRPDVSQILDNGEIIINYGDFLE
NNHTFVPSPYVEEWWIQDLEEKTKDKVEVNSPEEAFAVSEKYGVPLHPKYTYMWMDLTTD
DVVYLARYISASGMVENGELRLPVEQRSKSLLEILLIPQKVRDNTVILSAEDTYILCRCL
GLNPDLSMKNPDAYAGLDSHAWKAVSALCGVTVMDRAPARIGARMGRPEKSKLREMKPPV
HVLFPVGEAGGMRRSLQDASAYSKSMTDRIGEIEVEVGRRKCPDCGKMTYMVACECGGHT
IPVYGCPDCGISGIEGDCPKCHKPTTPNVKQKIDVKGLYAAALKRVGERDNFEVLKGVQG
LISKEKTPEPLEKGILRAKHEVFVFKDGTIRYDMSDVPLTHFIPREIGLSVEKARELGYE
KDTYGAPLESPEQVCELRVQDIILSHDASNYLLKVCAFLDDELEKYYGLPRYYNVHEEQD
LIGHLVIGLAPHTSAGVLGRIIGFVSSSAGYAHPFFHAAKRRNCDGDEDCVMMLMDGLLN
FSLSYLPDRRGGKMDAPLVLSMRIDPKEIDKESHNIDVMARYPKEFYLATREFKAPKDVE
KIMDLVSKRLGTPEQYEGFKFTHGTSDIAAGPANSAYKTLGSMEDKLKAQLELGRRLRAV
DEKDVAERVINSHFLPDLIGNLRAFSTQQMRCVKCGERYRRPPLTGTCPRCGGGRVILTV
HEGAVTKYMDVSLAIAKEYGVPSYTIQRLELLSLSIKSLFENDKSKQTGLADFM
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaagaccagcgaagcgcaggaagcctatttcaagaagctggaggcggagttc
ctccactgcagggagatcgctaccgccgcccggaggaagggctatgatccttctctggag
gtcgagatcccctcggcaacggaccttgctgaccgtgtagaggtcatcatgggcgtgccc
gggctggcggcgcacatccgcaagtgcgaggagaagatgtcccgtgaagaggcctcgctg
caggtggcggccgatattgcggaaggcctcgtcggcaagttcaaggacgaggaggaggcc
gtccagtgcgccgtccgcactgctgtggcggtcctgaccgagggcgtggtggccgcgccg
ctggagggcatctccgccgtcaagctggccaagaacgacgacggcaccgagtacatcaag
gtctattttgccggccccatccggagcgccgggggcacggcggaggcgctggccgtgctg
gccgccgactacgtccgccgtaagaccgggcgggcgccctacaagatcagggacgtcgag
gtggagcgctttgtagaagagatcatgctctacaagtcgatcgcccacctgcagtacacc
cctaccgacgaggagatccggctgatcgtgcggaactgccccgtatgcatcgacggggaa
ccgacggagcaggaggaagtccagggctaccgcaatctggaacgggtggagaccaaccgg
gtgcggggcggcatagcgctggttatcgcagagggcatcattctcaaagccccgaaagtc
aagaagcatgtggacaagctcaagttcgacggatgggagtggctggacaagatcatcgcc
ggctccaagcccgccgggggagagaacaaggaagaggagaagaagatcaagcccaaggac
aaatttttggcggacctgatcgcaggccgccccgtgttcgggcatccctcgagggcaggg
ggcttccggctcaggtacggccggtcccggaacacgggctttgccacggcaggcattcac
cctgcctccatgacgatcatggacgacttcatcgccacgggcactcagctgaaagtggag
cgccccggcaaggctgcggccatggtcccggtggacagcctcgaagggcctaccgtgcgc
ctgttcaacggtgacgtggtgcgcatcagcgatgaaaagaccgcgctgaaagtgcgcccg
gacgtatcgcagatcctggacaacggggagatcatcatcaactacggtgacttcctggag
aacaaccacacgttcgtgccttctccatacgtggaagagtggtggatccaggacctcgag
gagaagacgaaggacaaggtagaggttaactcaccggaggaagcctttgcagtgtctgag
aagtacggcgtgcctctgcacccgaagtacacgtacatgtggatggacctgaccacggac
gacgtggtctacctcgcccggtacatcagcgccagcggcatggtggagaacggcgaactc
cggctgcctgtcgagcagcggtccaagagcctgctcgaaatcctcctcatcccacagaag
gtgcgggataacactgtcatcctctcagcggaggatacgtacatcctttgcagatgcctg
ggccttaaccccgacctgtcgatgaagaacccggacgcctatgccggcctcgactcccac
gcctggaaggctgtgtcagcgctgtgcggcgtcacagtcatggaccgggctcccgcccgg
atcggcgcgaggatgggcaggcctgaaaaaagcaagctccgggaaatgaagcctccggta
cacgtgctcttccccgtgggcgaagcagggggcatgcgcaggtccctgcaggacgcgagc
gcctacagtaagtccatgaccgacaggatcggggagatcgaggtagaggtcggcaggcgc
aaatgcccggactgcgggaagatgacctacatggtggcctgcgagtgcggggggcacacc
atccctgtttatgggtgtcccgactgcggcatctccggcatagagggcgactgcccgaag
tgccacaagcctacgacgccgaacgtgaagcagaagatcgacgtcaagggcctctatgca
gccgccctgaagagagtgggggagcgggacaacttcgaggtgctcaagggcgtgcagggc
ctgatctcgaaggagaagaccccggagccgctggagaagggcattctcagggccaagcac
gaagtcttcgtgttcaaggacggcaccatccgttacgacatgagcgacgtgcccctcacc
cactttatcccccgggagatcggtctcagcgtcgagaaggccagagaactgggctacgag
aaggatacctacggggctcccctggagtcgccagagcaggtgtgcgagctccgggtgcag
gacatcatcctgtcccacgatgcctctaactaccttttgaaggtatgcgcgttcctcgac
gacgaactggagaagtactatggcctgcccaggtactacaacgtccacgaggagcaggat
ttgatcggccacctggtcatcgggctggctccgcatacctccgccggggtgctcggccgc
atcataggcttcgtctcatcatcggcaggctacgcccaccccttcttccacgccgctaaa
aggaggaactgcgacggggacgaggactgtgtgatgatgctgatggacggcctgctgaac
ttctctttatcctacctgcctgaccgccggggcggcaagatggacgcccccctcgtgctg
tcgatgcggatcgaccccaaggagatcgacaaggaatcgcataacatcgacgtgatggcc
cgctatccaaaagagttctacctcgccacccgggaattcaaggcccccaaggacgtggag
aagatcatggacctcgtctccaagcggctcggaacgccggagcagtacgagggcttcaag
ttcacccacggcaccagcgacatcgccgccgggcccgccaactccgcctataagaccttg
ggcagcatggaggataagctcaaagcccagctcgagctgggccggcggctccgggcggtg
gacgagaaggacgtggcggagcgggtgatcaactcccacttcctcccggacctgatcggc
aacctgagagccttttcgacgcaacagatgcggtgcgtcaagtgcggcgaaaggtaccgc
aggccccctctgaccggaacttgccccaggtgcggcggaggcagagtcatcctgaccgtc
cacgaaggtgcggtgactaagtacatggacgtctccctggccatcgcgaaggagtacgga
gtccccagctacacgatccagcggcttgagctgctgagcctgtcgatcaaaagcttattt
gagaacgacaagagcaagcagacagggctcgcggatttcatgtaa
DBGET
integrated database retrieval system
