Methanocella arvoryzae: RRC215
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Entry
RRC215 CDS
T00526
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rci03016
]
RRC215 (endA)
Enzymes [BR:
rci01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
RRC215 (endA)
Transfer RNA biogenesis [BR:
rci03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
RRC215 (endA)
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
DUF3673
Motif
Other DBs
NCBI-ProteinID:
CAJ37960
UniProt:
Q0W0Y3
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All DBs
Position
complement(317008..318069)
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AA seq
353 aa
AA seq
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MDSMKGVLKGDKVIFGGEAVAELYNAQYYGRLKGETLELALVEAAYLLDRERISVDQEGR
SLSFRDFFIAASQAQEYFELKYIVYRDLRERGYYVQPSVTDFRVYPRGGKPNVAPSKYFV
HVVTERKPMPLQQLISNLQAALNVRKEMVLAIVDEESDITYYGVKFNVLKGGMEPVQLTP
VPGSATFLQDRVVIWDTEVSTRLHQDGFYGNPMDDRRLQLSLVEAAYLIMRGKLEVTDYE
GRIMTPDDFTAKALQIESSFVGKLKTYTDLRDKGLVAKTGFKFGSDFRVYEKIETIEKIP
HSKYLVGYVENDHVYQMQDLSRSIRLANSVRKDMVFAFDRSGIQYFSLGRIKL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatagcatgaagggagtcctgaaaggcgataaagtgatctttggcggcgaggcggta
gccgagctgtacaacgcccagtactacggccgcctgaaaggcgagacgctggagctggca
ctggtggaagcggcttacctgctggaccgggagcgcatcagcgtggaccaggagggcaga
tcgctttcgttcagggactttttcatcgccgcatctcaggcgcaggagtacttcgagctc
aagtacatcgtctacagagatttacgggagcggggctactacgtgcagcccagtgtgact
gacttcagggtctatccgagaggtggcaagcccaacgtagcgccatcaaagtacttcgtc
catgtcgttacagagcgcaagccgatgccgctgcagcagctgatcagcaatttgcaggca
gccctgaacgtccggaaagagatggtcctcgccatcgtggatgaggagagcgacatcacc
tactatggtgtcaagttcaacgtgctaaaaggcggcatggagcctgtccagttaactccg
gtgcccggctcggccacgttcctgcaggaccgggtcgtcatctgggacaccgaagtatcg
actcgcctgcaccaggatggtttctacggtaatccgatggacgaccgaaggttacagctc
tcgctggtcgaggcagcctacctgatcatgcggggcaagctagaagtcacggattacgaa
ggccgtatcatgaccccggacgacttcaccgcaaaggcgctgcagatcgagtcctctttc
gtgggcaagcttaagacgtataccgatctcagggacaaaggcctcgtggcaaagacaggg
ttcaagttcggcagtgatttccgagtctatgaaaagatcgaaaccatcgagaagatccct
cactctaaatatctggtcggctatgtggaaaacgaccacgtctatcagatgcaggattta
tctagatctatccggctcgccaatagcgtccgtaaggacatggtctttgcctttgaccgg
agtgggatacagtacttcagcctgggccggatcaagctgtaa
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