Methanocella arvoryzae: RRC528
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Entry
RRC528 CDS
T00526
Symbol
mscS-5
Name
(GenBank) putative small-conductance mechanosensitive ion channel
KO
K16052
MscS family membrane protein
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rci02000
]
RRC528 (mscS-5)
Transporters [BR:
rci02000
]
Other transporters
Pores ion channels [TC:
1
]
RRC528 (mscS-5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
CAJ38215
UniProt:
Q0W078
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All DBs
Position
58363..59499
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AA seq
378 aa
AA seq
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MVATGFSKLYTDILLAVILLLASVLLAKAVNYFIKSIAPYIVSKTETTLDDEIIEAVNGP
LQYFIIVMGIYVSLLTIESLSGVFNFWIDRLLLVAVIFIAAYLLANLVNALLNWYRNDIA
PKTDSDFDDSFIPFLQKVAWAVISIISLLVALEQLHIIEITPLITGLGIVGVAVALAAKE
LLSNFFGSVAILSDRPYKVGDRVNIQGTDSGDVIEIGLRSTKIRTVDNRFIIVPNTKIAN
SRVMNYSQPDTHSVFEIKVGVSYDADIGKAAKIMKEIALATDGVLGDPAPTVHVTELGDS
AVKLLMLVPVENFRKSWEIPDRIYRQILKQFEAEGIEIPYPIQTVLVKKVQPDRSVQPQT
VSPIQQNADIAIINKGEN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggtggctacggggttcagcaaactatatacagatatactgctggcggttatactgcta
ctcgcttcagtcttgctggcaaaagcggtcaattatttcataaagagcatagcgccttat
atagtctcgaagactgagacgacgctggatgacgagatcatcgaggccgttaatggtcct
ctgcaatatttcatcatcgtaatgggcatctatgtctcacttctcaccatcgaatccctc
tcaggggtgtttaatttctggatcgacaggctgttgctcgtggccgtaatcttcatagca
gcctatctgttagccaacctcgtcaacgcgctgctcaactggtaccgtaatgacatcgcc
ccgaaaactgactctgacttcgatgactctttcataccgttcctgcaaaaagtcgcgtgg
gctgtcatttccatcatctccctgctcgtggcgctggagcagctgcacatcatcgaaata
actcctctgatcaccgggctgggaatcgtcggagtagctgtagctcttgccgccaaagag
cttttatccaactttttcggctcagtagccatcctcagcgacaggccttacaaagtaggc
gaccgggtgaacatccagggcacagactcgggcgacgtcatcgagataggcctacggagc
actaaaatacgcacagtcgataaccggtttatcatcgtgcctaacaccaaaatcgccaac
tccagagtaatgaactattcacagccggacacccattctgtcttcgagataaaagtaggc
gtatcctacgatgccgacatcggcaaggcggcgaaaatcatgaaagagatcgcccttgca
actgatggtgtactgggggatcctgcacccaccgtacacgtgaccgagctgggtgactcc
gcggtaaagctgttgatgctggtgcctgtcgaaaacttccgaaaaagctgggaaatccct
gacaggatctaccgccagatactcaagcagttcgaagccgagggcatagagatcccctac
ccgatacagacagtactggtcaaaaaagtccagccggaccgcagcgtacaaccgcagact
gtcagccccatccaacaaaatgctgatattgcaataatcaataaaggtgaaaattaa
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