Riemerella columbina: NYR17_00070
Help
Entry
NYR17_00070 CDS
T09247
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rcl
Riemerella columbina
Pathway
rcl00550
Peptidoglycan biosynthesis
rcl01100
Metabolic pathways
rcl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NYR17_00070
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NYR17_00070
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcl01003
]
NYR17_00070
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
NYR17_00070
Enzymes [BR:
rcl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NYR17_00070
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NYR17_00070
Glycosyltransferases [BR:
rcl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NYR17_00070
Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NYR17_00070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
ArgoMid
Motif
Other DBs
NCBI-ProteinID:
WKS95170
LinkDB
All DBs
Position
complement(13197..15557)
Genome browser
AA seq
786 aa
AA seq
DB search
MDSKQNTKKATFPLPPKKKKSTGYRKWIGLIWIGLIAFVLGITGLFFATSQGLLGEMPDV
KDLENPDIYVASEIISSDGVTLGKFEVEKTDPITYKDMPPYLIYALQAKEDERFKEHSGI
DLKSILRAIRYGGDRGGGSTITQQLAKLLFTKKASTNKLLRISQKLKEWVVAVSLEKRYT
KEEIITMYFNKFDFTYNAHGIEMASKIYFNKHTKDLTLPEAAMFVAMLEAPIANNPLRNI
ERATKRRDVVIKQMLETGYIDQATYEKAIAQPVAVHYTPIKNIEEGNSAYYKYYLRKEIN
NYLQEYEKKTGKSVNLFRDGLKIYVTLDSRMQKYAEEAIKEHLTQLQKSFDAEQRRNPNR
PFYKISKKSADNIMMQAVRRTGRYQQLKAAGVPEDSIMMDFHKPTKMTRFTWQGEEEVEM
TPWDSIRYHKQIAQAGLMSMDPSTGDIKAWVGGIDWQHFQYDHIKQGKRQVGSTFKPFVY
ATAIMNLGMTPCTPISNATYTKGNWRVAGSGGMLTIRDALAHSKNPVAARLIEAAGVDNV
IRLARDLGVESDIPRNNTIALGSSDITIYEMLGAYSTFANFGNYVKPEMIWRIEDANGRV
ITEVKTELKEVMNEKYAYSMIDIMRGVARYGTASGELRRRGISEGVEIAAKTGTTNNNSD
GWFIGMVPKLTTGVWVGWEDRATHFWSTGEGQGAKMALPIWAIFMKKVWANKELNISPDE
KFVKPSDWTNGCDDLRGMGGYGDEGALQTIEELRNPKPVETTKPQPKKDENINEKINSSD
DIDFNQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaacaaaatactaaaaaagcaaccttcccactgccgcccaagaagaaaaaa
tcaacgggttacagaaagtggattggtttgatttggatagggcttatcgcctttgtgctg
ggcattacagggttattttttgccacttcgcaaggcttacttggagagatgccagatgtg
aaagacttagaaaatccagacatctatgtggcttcggaaatcatctcttctgatggggta
actttgggtaaatttgaggtggaaaaaaccgatcctattacctataaagatatgccgcca
taccttatctatgccctacaagccaaggaagatgagcgttttaaagaacactcagggatt
gacttaaagtcaatccttagagccatccgttacggtggcgatcgtggtggcggttctacc
attacccaacagttggcaaagttgttatttaccaaaaaagcctccactaataaactgttg
agaatcagtcaaaaactgaaagaatgggtggttgccgtgagtttagaaaaacgatatact
aaggaagaaatcatcacgatgtatttcaacaagtttgatttcacctataatgcccacggc
atcgagatggcttctaaaatttactttaacaaacacaccaaagacctgaccctcccagag
gcagcaatgttcgtagcgatgttggaagcgcccatcgccaataaccctttgcgaaatatt
gagcgcgccaccaagaggcgagatgtggtaatcaaacagatgttagaaacaggttacatc
gaccaagccacttatgagaaggcgattgcgcaacctgtcgctgttcactatactccaatt
aaaaacattgaagaagggaattccgcttattataaatattatttaagaaaagaaatcaat
aattatttacaagaatacgaaaaaaagacaggaaagtctgttaatctctttcgagatggg
cttaaaatttatgttaccttagattccagaatgcagaaatacgcagaggaagccattaag
gagcatttaacccaacttcaaaaatcttttgatgccgagcagagaagaaaccctaaccgt
ccgttctataaaatcagcaagaaaagtgcggacaatattatgatgcaagccgtgcgaaga
acagggcgctatcagcaacttaaagccgcaggcgttcctgaagattccattatgatggat
ttccataagccaaccaagatgacccgcttcacttggcaaggcgaggaagaggtagaaatg
accccttgggattccatccgctaccacaagcagattgcacaagctggattgatgtctatg
gatccttccactggcgatattaaagcgtgggtgggcggtatagattggcaacacttccag
tacgaccatattaaacaaggaaaacgccaggtggggtctaccttcaagccgtttgtttac
gctacagccattatgaatttagggatgacgccgtgtacgcctatttctaatgccacctac
accaaaggcaattggcgcgtggcaggttctggcggtatgctgaccattagagatgccttg
gcacactccaaaaaccctgtcgcagccagattgatagaagccgcaggtgtggataatgtg
atccgtttagcccgagatttgggtgtggagagtgatattccgagaaataacaccattgca
ttaggttcgtcggatattaccatttatgaaatgttgggcgcgtatagcacctttgccaac
tttggtaattatgtaaaaccagagatgatttggcggatagaagatgcgaacggcagggtg
atcacagaggttaaaactgaactgaaagaagtgatgaacgagaaatacgcctattctatg
atagacattatgagaggcgttgcccgttatggtactgcatctggagaacttcgcagaaga
ggcatcagcgagggagtagagattgccgccaaaacagggacaaccaataacaactcagac
ggttggttcattggtatggtaccgaaattgaccactggtgtttgggtaggttgggaagac
cgtgccactcacttctggagcactggcgaagggcaaggggcgaaaatggcactccctatt
tgggctatttttatgaagaaagtttgggcgaataaagagctcaatatttcccctgatgag
aaatttgtaaaaccttccgactggacaaacggttgtgatgacctccgaggaatgggcggt
tatggtgatgaaggtgcactgcaaaccatagaagaactgcgaaaccctaagcctgtggag
accacaaagccgcaacctaaaaaagatgaaaacatcaatgagaaaatcaattcctcagat
gatattgattttaaccaataa
DBGET
integrated database retrieval system
