Riemerella columbina: NYR17_00250
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Entry
NYR17_00250 CDS
T09247
Name
(GenBank) HAD hydrolase family protein
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
rcl
Riemerella columbina
Pathway
rcl00541
Biosynthesis of various nucleotide sugars
rcl01100
Metabolic pathways
rcl01250
Biosynthesis of nucleotide sugars
Module
rcl_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NYR17_00250
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rcl01005
]
NYR17_00250
Enzymes [BR:
rcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
NYR17_00250
Lipopolysaccharide biosynthesis proteins [BR:
rcl01005
]
Lipid A
NYR17_00250
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Paralog
Gene cluster
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Motif
Pfam:
Hydrolase
Hydrolase_3
HAD_2
S6PP
HAD
Motif
Other DBs
NCBI-ProteinID:
WKS95206
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Position
complement(56024..56542)
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AA seq
172 aa
AA seq
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MSYKQRLKQIKAFVFDVDGVFTDGSIFLMPDGSMSRVMNVLDGYAVVKALRKSYKIGVIT
GGNDPMVKNRLQYLGITDYYPKSSDKLLDYEAFKNQHQLKDEDILTMGDDLPDLPMMKAS
AIATCPPNARPEVKAISDYISPTLGGSGAVRDVIEQVLKAQNQWSEDDTRSV
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaacagcggttaaaacagattaaagctttcgtttttgatgtagatggcgta
tttaccgacggtagtatttttttgatgccagatgggagtatgtctcgggtaatgaatgtg
ttagatggctatgcggtggtcaaggctttgaggaaatcttataaaatcggcgtgattaca
ggcggcaacgacccgatggtgaaaaatcggctgcaatatttaggcatcacagattattac
cccaaatcttcggataaattattggattatgaggcgtttaaaaatcaacatcagctcaaa
gatgaggatatccttaccatgggagatgatttacccgacctcccgatgatgaaagcctct
gccatagctacttgtccgcccaatgcacgaccagaagtcaaagccatttcggattatatt
tcacccactttggggggtagtggtgccgttagagatgtgatagagcaagtgctaaaagcc
caaaaccaatggtcagaagatgatacccgctcggtttaa
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