Riemerella columbina: NYR17_00390
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Entry
NYR17_00390 CDS
T09247
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rcl03110
]
NYR17_00390
Chaperones and folding catalysts [BR:
rcl03110
]
Heat shock proteins
HSP100
NYR17_00390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
Sigma54_activat
AAA_22
AAA_16
nSTAND3
AAA_18
AAA_14
Torsin
RuvB_N
TniB
AAA_7
IstB_IS21
ResIII
DUF815
Zeta_toxin
UVR
AAA_25
ATPase_2
DUF87
DUF6381
Motif
Other DBs
NCBI-ProteinID:
WKS95231
LinkDB
All DBs
Position
86075..88579
Genome browser
AA seq
834 aa
AA seq
DB search
MNNKFSEGLDRVLKISASEARRLESEFLNTEHLLLGILKTDNSAREILQTLNADLTQIRR
KIEALNSIGNNALLNKETEVIPFTKMADYALKRADLESRSYKAGHINTVHLLLGILYKME
DPTTQILEGYDVDYEAVAKAYRHMLQQNGMLPKMNNTYGESEEQESYGQSRRPSSSVVSG
KSKTPTLDSFGRDLTHLAKEGKLDPVIGREKEIERVSQILSRRKKNNPLLIGEPGVGKSA
IAEGLALRIYQKKVSRVLYNKRVITLDLASLVAGTKYRGQFEERMKAIMTELEKNRDVIL
FIDEIHTIVGAGGSTGSLDASNIFKPALARGEIQCIGATTLDEYRQNIEKDGALERRFQK
VMVEPTSIEETIQILYQIKDKYEEHHNVTYTDDAINACVNLTARYITDRFLPDKAIDAMD
EAGSRVYIKNMKVPTEIIDFEAKIEEAKDLKQKAVKAQDYLEARRLKDEEERLQIELNLA
QEAWDKEVKEMKEVVTEENVAEVVSMMSGVPVTKVGKNELDKLAEMDQNLNGKVIGQENA
VKKVVKAIQRNRAGLKDPNRPIGTFIFLGTTGVGKTELAKVMARELFNSDEALIRIDMSE
YMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYAVVLLDEIEKAHPDVFNLLLQILDE
GFVTDSLGRKIDFRNTIIILTSNIGTRHLKDFGDGVGFGTTAKKSNVDANARNTIESALK
KAFAPEFLNRIDDIIIFNSLEKEDIKKIIDLELNKLYERLNKLGYTVSLTEDAKDFIAEK
GWDKDFGARPLKRAVQKYIEDLLAELLVTKQLQEGEAIVLQLNETKDALEKQNA
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaattttcagagggcttagatagagtcctaaaaatcagtgccagcgaggcc
agacgcttagaaagcgagttcttaaatacagaacacctcctcctcggcatcttaaaaact
gacaattctgcaagagaaatattacaaaccctcaatgctgatttaactcaaatcagaaga
aaaatagaggcgctcaatagtattgggaataatgccctcctcaacaaagaaaccgaggtg
attccatttactaaaatggctgattatgcccttaaaagagctgatttagaaagcagaagc
tacaaagcaggccatatcaacaccgtgcaccttctcttgggcatcctctacaaaatggaa
gacccaaccacgcagattttagaaggctatgatgtagattatgaagccgtagcaaaagcc
taccgacatatgctacaacaaaacggaatgctccccaaaatgaacaatacctatggcgaa
agcgaggagcaagaaagttatggacagagcagacgcccctccagcagcgtggtaagcggc
aagagcaaaacgccaacattagacagctttgggcgcgacctaacccacctcgctaaagaa
gggaaattagatcctgtgattgggcgcgagaaggagatagagcgcgtttctcaaatttta
tcgagaagaaagaaaaacaacccgctcctcatcggggaacctggcgtgggtaaatccgcc
attgccgaaggtttagcgcttagaatttatcagaaaaaagtttctcgagtgctttataat
aaaagggtaatcaccttagatttagccagtttagtggcaggcaccaagtaccgcggtcag
tttgaggagcggatgaaagccattatgacagaattggagaaaaatagagatgttatcctc
tttattgatgaaatccataccattgtaggcgcaggcggttccacagggagtttagacgcg
tccaatatatttaaacctgcccttgccagaggcgaaatccaatgcattggtgctacaaca
ttagatgaatatcgacagaatatagaaaaagacggtgctttagaaagacgcttccaaaaa
gtaatggtggagcctacttccatagaggaaaccatacaaattctctatcagattaaagac
aaatacgaggagcatcataatgtcacttataccgatgatgccattaacgcgtgtgtgaac
ctcaccgccagatacattaccgaccgttttcttcctgataaagcgatagatgcgatggat
gaagcgggttcaagggtttacattaaaaatatgaaagtgcctaccgaaattattgatttt
gaggctaaaatagaagaagccaaagatctcaagcaaaaagcggtaaaagcacaagattat
ttggaagcccgccgacttaaagatgaggaagagcgcttacaaatagagctcaacttagca
caagaggcttgggataaggaagttaaggaaatgaaagaagtggtcaccgaagaaaatgtt
gccgaagtggtttcaatgatgagcggcgttcctgtgaccaaagtgggcaaaaatgagtta
gacaaattggcggaaatggaccaaaaccttaatggcaaggttattgggcaagaaaatgcc
gtaaaaaaagtagtgaaagccatacaacgtaacagagctgggctcaaagacccgaaccgc
ccaatcggtactttcattttccttggaaccacaggcgtcggaaaaaccgaattggcaaaa
gtgatggcacgagaactcttcaactccgatgaagccctcatcagaattgatatgagtgaa
tatatggagaaatttgccgtttctcgcttggtgggtgcgcctccagggtatgtaggctat
gaggaaggcggacagctcaccgaagccgtgcgcagaaaaccctatgccgtggtgctttta
gatgagatagaaaaagcccacccagatgtgtttaacctcctattgcagattttagatgaa
ggctttgtgaccgatagtttaggcagaaagattgattttagaaataccattatcatccta
acttctaacattggtacgcgccacctcaaagactttggcgatggtgtgggcttcggcact
actgcgaagaaatctaatgtagatgccaatgccagaaataccatagaaagcgccttgaag
aaagcctttgcaccagagtttttaaatagaattgatgatattatcattttcaattcgctg
gaaaaagaagacatcaaaaaaatcattgatttagagctgaataaactctacgaaagactc
aacaaactcggttatacggtgagtttaacagaagatgccaaagacttcattgcggagaaa
ggttgggataaagacttcggtgccagacctctaaaaagagcggtacagaagtatatagaa
gacctgctggcagagcttttagtgaccaaacagctccaagagggcgaggccattgtcctc
caactcaacgaaaccaaagatgccttagaaaagcaaaacgcttaa
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