Riemerella columbina: NYR17_00430
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Entry
NYR17_00430 CDS
T09247
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
rcl
Riemerella columbina
Pathway
rcl00130
Ubiquinone and other terpenoid-quinone biosynthesis
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
NYR17_00430 (menD)
Enzymes [BR:
rcl01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
NYR17_00430 (menD)
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Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M_2
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
WKS95239
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Position
95945..97627
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AA seq
560 aa
AA seq
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MKQYTSKRSIQILAHLLQQYGIHHIIISPGSRNAPLAIHFTEIENINAYSIIDERSAAFV
AMGMAQSLRKPVAVSCTSGSAAANYYPAVVEAFYQNIPLLLLTADRPSDFTDRFDGQTIR
QNQLYQQHAYGSFQLLEDSQPDADDYNFSTIKKAIETCFEKQGPVHINIPLEEPLYQLVP
ELPILPPVERTQPEEHFTPEASLIAEWNTSKKIMILTGTLHHNEVLETYLDQLAKNHSVV
VLTEANSNLHNPKFFGHIDRYIFSITPEEIPYYAPDLLITIGQNVVSKKIKQFLRMAPIK
NHWHIDPYWQPDTYFALNRKLATTPEAFFSAIINQIKIEPTPYFQLWDTLREKKDRLHAA
YAQQADFSDFKVFDTLCEAVPAHYQVHISNSSAIRYAQLFDFVHQNPIYCNRGTSGIDGS
TSTAMGFAMVSEQPTLLITGDISFFYDINGLWNPYIPPYTRIIILNNGEGNIFRIIPGPD
TTNALEEFIATTHQKNAELLAKHFGFSYFRLDDLSTLERSLPLFFEAGEQPKILEISTKN
APNADTLKAYFKFLNPPSTV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatacacctccaaacgcagcatccaaattttagcccacttgctccagcaatac
ggcattcatcatatcatcatttccccagggtccagaaatgcccctcttgcgatccacttt
acggaaatagaaaacatcaatgcgtatagcattattgatgagcggagcgcagcatttgta
gcgatggggatggcacaaagcctcagaaagcccgttgctgtgtcttgtaccagtggctct
gcggctgccaactattaccctgccgtagtggaagcgttttatcaaaacattccgctcctc
ctcctcactgccgaccgaccttcggactttaccgaccgatttgatgggcagaccattcga
caaaaccaactttaccaacagcacgcctatggcagttttcaactcttagaagacagccaa
ccagatgctgatgattataacttcagtaccattaaaaaagcgatagaaacttgttttgaa
aaacaaggtcccgtgcatattaacattcctttggaagagccactctatcagttggtgcca
gaattgccaattttgcctcctgtggagagaacacaacccgaggaacactttaccccagag
gcttcccttattgcagagtggaatacttctaaaaaaattatgatcctcacgggaacgcta
catcacaacgaggttttagaaacttaccttgaccaattggcgaaaaaccattctgtggtg
gtccttacagaagcgaattctaacctgcataaccctaagttttttgggcatatagaccgc
tatattttcagcattacccctgaggaaattccttattatgcgccagatttgctcattacc
attgggcaaaatgtggtttctaagaagattaagcaatttttgcggatggcgcccatcaaa
aaccattggcatatagacccttattggcaacccgatacttattttgccctcaaccgaaaa
ttagccaccacgccagaagcttttttctccgctattatcaatcaaatcaaaatagagcct
acgccttattttcaactttgggataccctccgagagaaaaaagaccgtctgcacgccgct
tatgcccaacaggctgatttttcagatttcaaggtttttgataccctctgcgaggcagtt
cctgcacattatcaagtccatatttctaacagttctgccattagatacgcccagttgttt
gatttcgtgcatcaaaatccgatctactgcaaccgtggcaccagcggcattgatggctcc
acctctacagctatgggcttcgcaatggtcagcgagcaacccacgctgcttatcactgga
gatattagctttttctacgatattaacgggctttggaatccttacattccgccatatacg
cggattattatcctcaacaacggcgagggcaatattttccgcatcatccctggaccagat
accaccaatgctttggaggagtttattgcgaccacacatcaaaaaaatgcagaactattg
gcgaaacattttgggttttcttatttcagattagatgatttatccaccttagagcggagt
ttgccgctgttctttgaagctggagagcaacccaaaattttagaaatttccaccaaaaat
gcccctaatgcagacacgctgaaagcgtattttaaattcttaaatccaccttctacagta
taa
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