Riemerella columbina: NYR17_00850
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Entry
NYR17_00850 CDS
T09247
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
rcl
Riemerella columbina
Pathway
rcl00300
Lysine biosynthesis
rcl00470
D-Amino acid metabolism
rcl00550
Peptidoglycan biosynthesis
rcl01100
Metabolic pathways
rcl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NYR17_00850
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NYR17_00850
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NYR17_00850
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NYR17_00850
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
NYR17_00850
Enzymes [BR:
rcl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NYR17_00850
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NYR17_00850
Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
Precursor biosynthesis
Amino acid ligase
NYR17_00850
Racemase
NYR17_00850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WKS95318
LinkDB
All DBs
Position
complement(191866..194310)
Genome browser
AA seq
814 aa
AA seq
DB search
MDYTIKQLSEIFGVPYFGSPDARVKHLAFDTRTIYSTQDTAFIAIKTQKNNGEKYIREAI
EKGIKIIISEHKIADIAGVSWLIVPHSLAFLQNLAQYHLRQHSLKTIGITGSNGKTIVKE
WLYQCLSETYNAVKSPKSFNSQLGLPLSLLKIDATHELGIFEVGISQPKEMAVLASIFPP
QIGVLTHIGTAHIAHFKDLEALILEKIALFESSEVIIFNGDNPLVKNKILALYSTKTLIS
YGLQPHHEVYIASDWKNRNLPIVVQCLDTIITFEAQQRDEATLTNVLAVISVLHYLGFSN
AEIIEKINVLKAVEMRLEQVNGIRNNLIINDSFNLDLDSLKIAFEFIKTHNKPLKSLVIT
DFAEANHTPSLYQEVARLTNEQGFNRVFLIGAEITQYQNLFSAESFCFNNIEELFKNQTF
NQLENQLVLLKGARKFEIEKVKTYLELQKHDTVLEVNLSKILHNINCHKALLKPETKMMA
MVKAHSYGLGGYEIAEFLQHHHLDYLGVAVADEGAELRKHGITLPIIVMNPEQHSYNAII
DFKLEPNIYSFRVLELFYEQLKQRGYQGHYPIHIKLETGMHRLGFKPFELPDLIQRLKQM
KLQVVSIFSHLSSSDLPTEKDYTESQCLSFQAMANTLIAGLGYTPILHILNSAGITNYPE
YQMDMVRIGIGMIGISSNPKIKALLQPAVAFKSVISQISEIVPQDSVSYGRRYKAEHKTR
IATIPVGYADGVPRLVGNQVGQVNIKGQLCPIIGSVCMDMMMVELGDLPAKEGDEVVIFH
ENPSIETFAEYCQTIPYEVLTSISRRVKRIYIKD
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggactacacgattaagcaactttctgaaatttttggagtgccttattttggctcgcct
gatgcccgcgtgaagcacctcgcttttgatacccgcaccatttattccacgcaggatact
gcctttatcgccattaaaactcaaaaaaataatggcgaaaaatacatccgcgaggcgata
gaaaaaggcattaaaatcattatttctgaacataaaatagcggatatcgctggcgtttct
tggcttatcgtgcctcatagtttggcttttttacaaaatttggcgcaatatcatcttcgg
cagcattccttaaaaaccattggcattacggggagcaacggcaaaacaattgtgaaagaa
tggctctaccaatgcctctccgaaacttataacgctgtaaaaagccctaaaagcttcaat
tctcaattggggttgccgctttctttattaaagatagatgccacgcacgaattgggcatt
tttgaagtcgggatttctcagcccaaagaaatggcagttttagcgtctatttttccccct
caaataggggttttaacccatattggcacagcacacattgcccattttaaagatttagaa
gcccttattttagaaaaaatagccttatttgaatcctccgaagtgattattttcaacggc
gataatccattggttaagaataagatattagccttatattctaccaaaactttaatatcc
tatgggcttcaacctcatcacgaggtttatattgcctcggattggaaaaaccgcaatttg
cctattgtggtgcagtgtttagataccatcatcacttttgaagcccaacagagagatgaa
gccacgctgaccaatgtgctggcggtgattagcgtgctgcattatttagggttttccaat
gccgaaattatagagaaaatcaatgtgctaaaagcggtggaaatgcgcttagagcaagtg
aatggcattcggaacaatctgattatcaacgattctttcaacttagatttggattctctt
aaaatcgcttttgagttcatcaaaacccataacaaaccgctgaaatcattggtaattaca
gattttgccgaagccaaccacacgccctcactctaccaagaggtggcgaggctgaccaat
gaacaaggcttcaaccgagtgtttttaatcggtgcggaaattacacaatatcaaaatctg
ttttcagctgaaagtttttgttttaataacatagaagaactatttaaaaatcagacattt
aatcaattagaaaatcagctggttttactcaaaggggcaagaaaatttgagattgaaaag
gtaaaaacctaccttgaactacagaaacacgatactgttttagaagttaatctcagcaaa
atcctccataacatcaactgccacaaggcattactaaaaccagaaaccaaaatgatggca
atggtaaaagcccattcctatggcttgggcggttatgaaatcgctgaatttctccaacac
catcatttggattatttgggcgttgcggttgctgatgagggcgcagagttgcgaaaacac
ggcattaccctccccatcatcgtgatgaaccctgagcaacacagctacaatgccattatt
gattttaaattagaacctaacatttacagtttcagagtattagagctgttttatgagcaa
ttgaaacaacggggctaccaaggtcattatccaatccacatcaagttagaaacaggaatg
catcggcttggttttaaaccttttgaattacctgatttaatccaacgcttgaaacaaatg
aaactccaagtggtaagtattttcagccatctttccagctctgatctccccaccgaaaaa
gactataccgaaagccaatgccttagttttcaagctatggcaaatactctaattgctggg
ctcggttatacgcctattttgcatatcctcaattccgctgggattaccaattatcctgaa
tatcaaatggatatggttagaattggtatcggaatgattggcatttcttccaacccaaaa
atcaaggcgctgttacaacctgcggtcgctttcaaatcggtgatttctcaaatttcggaa
attgtccctcaggatagcgtgagctatggcaggcgctacaaagccgagcacaaaacacgg
attgccacgattcctgtgggctatgccgatggcgttccaaggctggtaggtaaccaagtg
ggacaagtgaacattaaaggacagctctgccccatcattggcagcgtgtgtatggatatg
atgatggtggaactgggcgaccttcctgccaaagagggcgacgaggtggttattttccac
gaaaatccttccatagaaacctttgccgaatactgccaaaccattccctacgaggtgctg
acctccatttccagacgcgttaagcgcatttatattaaagactaa
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