Riemerella columbina: NYR17_01075
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Entry
NYR17_01075 CDS
T09247
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
rcl
Riemerella columbina
Pathway
rcl00053
Ascorbate and aldarate metabolism
rcl00520
Amino sugar and nucleotide sugar metabolism
rcl01100
Metabolic pathways
rcl01240
Biosynthesis of cofactors
rcl01250
Biosynthesis of nucleotide sugars
Module
rcl_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
NYR17_01075
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
NYR17_01075
Enzymes [BR:
rcl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
NYR17_01075
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
KR
NmrA
DUF7723
adh_short
Motif
Other DBs
NCBI-ProteinID:
WKS95362
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Position
239414..240445
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AA seq
343 aa
AA seq
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MVYLITGGSGFIGSHLVEALLKKGHSVINIDNFDDFYAYPIKIKNTLESVGLPTDFDFTN
DKTEDIHRLITQTTSDNYQLYYQDIKDKEGIDEIVKKHHPDMVIHLAALAGVRPSIERPL
DYEAVNIRGTMNLWEVCKDRGIKKFVCASSSSVYGNNEKVPFSETDNVDRPISPYAATKK
CGEILGHTYHHLYGIDMIQLRFFTVYGPRQRPDLAIHKFTKMMSEGQAVPFYGDGSTARD
YTYIADIIDGILKSIAYLETHQGVYEIINLGESEVVTLNAMLQTIETTMEKTAIRNQQPM
QPGDVQKTNADIQKAKKMIGYAPSTNFQNGIKKFVEWFLRKQA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggtatatcttatcacaggcggcagtggctttattggttctcatctggtagaagctttg
ttaaaaaaaggacattctgttatcaatatagacaattttgatgatttttatgcctatcct
atcaaaatcaaaaacaccttagaatccgtaggtcttcccaccgattttgattttaccaat
gataaaaccgaggacattcatcgcctgataacgcagactacttcggataattatcaactt
tattatcaagatattaaagataaagagggcatagatgaaatcgtgaaaaaacaccacccc
gatatggtgattcatctggcggcattggcaggcgttcgcccatcgatagagcgcccactc
gactacgaagccgtgaatatccgtggcacgatgaacctttgggaagtctgcaaagataga
gggattaaaaagtttgtttgtgcttcatcttcaagtgtttatgggaataatgaaaaggtg
cctttttctgaaacggataatgtagaccgtcccatatcgccttatgcagccaccaaaaaa
tgcggtgaaattttagggcatacttaccaccatttgtatggtattgatatgatacagttg
cgattttttaccgtgtatggacctcgccaaagacctgatttagcgatacataaatttacc
aaaatgatgagcgaagggcaagccgtacctttctatggcgatggctccacggcgagagat
tacacttatattgcggatattattgatggcattctaaaatccatcgcctatttggaaacg
caccaaggggtttatgaaattatcaacttaggagaaagcgaggtggttaccctcaatgct
atgctccaaaccatagaaaccacgatggaaaaaaccgccatacggaaccagcagcctatg
caacctggcgatgtgcaaaaaaccaatgccgatatacaaaaagccaaaaaaatgatcggc
tatgccccatcaactaacttccaaaatggcataaaaaaatttgtggaatggtttttgaga
aagcaagcctaa
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