Riemerella columbina: NYR17_01130
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Entry
NYR17_01130 CDS
T09247
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
rcl
Riemerella columbina
Pathway
rcl00550
Peptidoglycan biosynthesis
rcl01100
Metabolic pathways
rcl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NYR17_01130
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NYR17_01130
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
NYR17_01130
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcl03036
]
NYR17_01130
Enzymes [BR:
rcl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NYR17_01130
Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NYR17_01130
Chromosome and associated proteins [BR:
rcl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NYR17_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Cas6_N
Motif
Other DBs
NCBI-ProteinID:
WKS95372
LinkDB
All DBs
Position
249611..251602
Genome browser
AA seq
663 aa
AA seq
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MKNNSDFIKKRTTALHMGYFLAFIALLIFVAFIFRILIIQNTNVEEINDDIKKNFREAKL
KAARGNLYAADGSILATTVMRYDIYVDFKTIRDTVYRANIGALSDSLGRMFGKPRSYFRD
KFDKERKRGNQYYSLVKDLDFDEYNRIRQFPIFSKGQNRGGFIVEKKYQRELATNMIGRG
TIGLDNGVYKSGLEGAFSQYLSGKDGSRFEQRINSSQWKPIDYWQIKEPEDGSDVYTTLD
LRIQDIAHSALEKQLINFDADHGSVVVIETATGKVRAMVNLRRQEPGVYIDAYNYTLKDA
TEPGSTFKVVSLLAAMDDGFIDENTTVNVGNGTWTYAKQTISDGHGGGTYDISDVLAKSS
NVGSAKLIVKYYADNPQVFFGHLKRWKMFDKMDIELPGTTKPFVVTPDNSRWNKATLASL
AYGYSSRFNLLQLATFYNGIANKGKMVKPLFIDKIVKNGKVTYEAKPEVMVNKMASDKAI
EMMTHALTKAVEKGTAKSIFTPNLKMAGKTGTARFEYWIPGGPMKYQSSFAGFYPADNPK
YTCLVMVNQPDTSKGFYGATVAAPVFKEIAGKTFLKTPLNVEKEMLVDKKVNLNKLTPAQ
TKITINNHTMPHLEGLIGKEVIPQLENLGYRVEYKGVGKVLEQFPKEGTYIKKDQKIYLT
LQR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataatagcgattttataaaaaaacgaaccacagcgcttcatatggggtatttt
ttagccttcatagcgttgcttattttcgtggcttttatttttagaattctgattatccag
aacaccaatgtggaagaaatcaatgatgatattaagaaaaacttccgcgaggctaaacta
aaagcggcacgtggcaatctctatgcggcagatggctctatactggcaaccaccgtgatg
cgctatgatatttatgtagatttcaaaaccattagagataccgtttatagagccaatatc
ggcgctctatccgattctctggggcggatgtttggcaagccacgcagctattttagagat
aaatttgataaagaaagaaaacgcggcaaccaatattacagcttggttaaagatttagat
tttgatgaatataatagaattcggcaatttcccattttctccaaaggacaaaaccgaggc
ggctttatcgtagagaaaaaataccaaagagaactcgctaccaatatgattggtagagga
accattgggttagacaacggcgtgtataaatctggtttagaaggtgctttcagtcaatat
ctatcagggaaagatggctctagatttgagcaaagaatcaactcctcccagtggaaaccc
attgattattggcaaattaaagaacccgaagacggcagcgatgtctataccactttagac
ttaagaattcaggatatcgcccattctgcattagaaaagcaactcatcaattttgatgca
gaccatggctcggtggtggtgatagagacagccacgggcaaagtgcgcgctatggtcaac
ctccgcaggcaagaacctggcgtgtatatagatgcctataattataccctgaaagatgcc
acagaaccaggctccacttttaaggtggtttctctgttagctgcgatggatgatggcttt
attgatgaaaacacaaccgtgaatgtgggcaacggcacttggacttatgctaagcaaact
atttctgatggccacggcggcggcacctatgatattagtgatgtcctcgccaaatccagt
aatgtagggtctgccaaactcattgttaaatattatgcggataatcctcaagtgtttttt
gggcacctcaagcgctggaagatgtttgacaaaatggacatagaactgcctggcaccacc
aaaccatttgtggtaacgcctgataactcgcgctggaacaaagccactttagcttctttg
gcgtatggctattcttcacggtttaatctgttacaactggcaactttctacaacggaatt
gccaataaaggtaaaatggtgaagccgcttttcatcgataaaattgtgaaaaatggcaaa
gtcacctacgaggcaaaacctgaggttatggtcaataaaatggcatcagataaagctata
gagatgatgacacacgctcttaccaaagccgtagaaaagggaacggctaagagtatcttt
acgcccaatctcaaaatggcggggaaaacaggtacggcaaggtttgaatattggattcca
gggggcccaatgaagtaccagtcttcgtttgcgggcttttatcctgccgacaatcctaaa
tacacttgcttggtgatggtcaatcagccagatacttccaaagggttttatggcgcaacg
gtggcagctcctgtttttaaggaaattgcaggtaaaactttcttgaaaacgccgctcaat
gtggaaaaagaaatgttggtagataaaaaagtgaacctcaataaactgacgcctgcgcag
actaaaatcacaatcaataaccatacaatgccacatttggaaggcttgattggtaaagaa
gtgattccgcaattggagaatttaggctatcgcgtggagtacaaaggggtggggaaagtc
ttagaacagtttcctaaagaggggacttatattaagaaagatcaaaaaatatatctaacg
ctacaaagataa
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