Riemerella columbina: NYR17_01280
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Entry
NYR17_01280 CDS
T09247
Symbol
hchA
Name
(GenBank) protein deglycase HchA
KO
K05523
D-lactate dehydratase / protein deglycase [EC:
4.2.1.130
3.5.1.124
]
Organism
rcl
Riemerella columbina
Pathway
rcl00620
Pyruvate metabolism
rcl01100
Metabolic pathways
rcl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
NYR17_01280 (hchA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcl01002
]
NYR17_01280 (hchA)
Enzymes [BR:
rcl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.124 protein deglycase
NYR17_01280 (hchA)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.130 D-lactate dehydratase
NYR17_01280 (hchA)
Peptidases and inhibitors [BR:
rcl01002
]
Cysteine peptidases
Family C56: PfpI endopeptidase family
NYR17_01280 (hchA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DJ-1_PfpI
ThiJ_like
DUF1786
Motif
Other DBs
NCBI-ProteinID:
WKS95401
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All DBs
Position
285830..286678
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AA seq
282 aa
AA seq
DB search
MTQELSKEPIFDGVGYEPSPFSRAQFVAAKTDYDFTQYDRPNTDKNKKILVVCTQEQYMT
MQNGKMFSTGNHPVETLVPMLHLEAAGFESVIFTPTGKPVVLEMWAMPSEDEAVKGIYEK
YRAQFEHPRSLKDFVENGMQSEEDFVAVFTPGGHGAMLGLPANNDLKKVIYWVLDEDKYM
LSICHGPATLLAAAHEEAPENYPYKGYKIASFPDVIDTQTPEIGYVPGKMPWFYGEKLQK
LGVEIINEGISGLCHTDRKLITGDSPLAANNFGKMSAEALLS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaattaagcaaagaacctatatttgatggtgtgggctacgagccatcgccg
ttttctcgcgcgcagtttgtagcggcaaaaaccgattatgattttacccaatacgaccgc
cccaacacagataaaaacaagaaaatattggtggtttgtacccaagaacaatatatgacc
atgcagaatggcaaaatgttctctacgggcaatcaccctgtggaaacgctggtgccgatg
ctgcacttagaggcggcagggtttgagtcggtgatttttacgccaacaggaaaacctgtc
gttttggaaatgtgggctatgccaagcgaagatgaggcggtaaaagggatttatgaaaaa
taccgcgctcagtttgagcatccaagaagtttaaaggatttcgtagagaatggtatgcag
tcagaagaggattttgtggcggtgtttacccctggtgggcacggcgctatgcttgggctt
cctgccaataacgacctcaaaaaggtgatctattgggttttagatgaagataaatatatg
ctgtctatttgtcatggtcccgctacgctgctggcagctgcacacgaggaagcgccagaa
aactacccttataaaggttacaaaatcgcttcgtttcctgatgtgatagacacacaaacg
ccagaaataggctatgtgccaggcaaaatgccttggttctatggcgagaaactccagaaa
ttgggtgtggaaattatcaatgaaggcatttcagggctttgccacacggatagaaaactc
attacaggggatagccctttggcagccaataattttggaaaaatgagcgcagaagcgtta
ttgtcttaa
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