Riemerella columbina: NYR17_01415
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Entry
NYR17_01415 CDS
T09247
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcl03016
]
NYR17_01415 (miaB)
Enzymes [BR:
rcl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NYR17_01415 (miaB)
Transfer RNA biogenesis [BR:
rcl03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NYR17_01415 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
WKS95426
LinkDB
All DBs
Position
complement(312810..314243)
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AA seq
477 aa
AA seq
DB search
MQEKYIDETKQGEAYAIAEKPKNHKKLFLESYGCQMNFSDSEIVASILSEQGYNTTLKAE
EADLILLNTCSIREKAEQTVRMRLSQFKNLKSEKPSLTVGVLGCMAERLKTKFLEEEHLV
DLVVGPDAYRDLPNLLKETEGGKDAINVILSKEETYADISPVRLGGNGVTAFVTITRGCD
NMCTFCVVPFTRGRERSRDPHSIIEECKELWNNGYKEITLLGQNVDSYLWYGGGPKKDFD
KASEMQKATAIRFAQLLEMVAQELPKMRIRFATSNPQDMSIEVFKMMAKYPNICKYVHLP
VQSGSNAILKAMNRQHTREEYLDLIKQAKAIVPDIAFSQDMIAGFCGETEQDHQDTLSLM
KEVEYDYGYMFAYSERPGTPAHKKMEDDVPAEVKKRRLQEIIDLQGELSRKRMKSYVGRT
HEVLIEGESKKDKNQWKGRNSQNAVVVFDKAEGQNIGDLVEVFVYDNTQGTLLGRIN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaaaaatatatagacgaaaccaaacaaggcgaggcatacgccattgccgagaaa
cccaaaaatcataaaaaactcttcttagagagctatggctgccagatgaatttttcggat
agcgaaattgtggcttctatcctcagcgagcaaggctacaacaccacgctaaaagccgag
gaagccgatttaatcctcctcaacacctgttctattagagagaaagccgagcaaaccgta
agaatgcgcctctcacagtttaaaaacctcaaaagcgagaagcccagccttaccgtaggc
gttttaggctgtatggcagagcgcctcaaaaccaagtttttagaagaagaacacttggta
gatttagtggtgggcccagatgcctaccgagatttgcccaacctcctcaaagaaactgaa
ggcggcaaagacgccatcaatgtaatcctctccaaagaagaaacctatgctgacatcagc
cctgtgcgcttgggaggcaacggcgtgaccgcttttgtgaccattacccgcggctgtgat
aatatgtgcaccttctgcgtggttccctttacccgaggcagagagcgcagccgagacccc
cactccatcattgaagaatgcaaggaactttggaacaacggctacaaagaaattacactc
ctcgggcagaatgtagattcttacctttggtacggtggcggtcctaaaaaagactttgac
aaagcctccgagatgcagaaagccacagccattcgctttgcacaattgttagaaatggtg
gcgcaagaactaccgaaaatgagaattcgctttgccacttctaaccctcaggatatgagc
atagaagtcttcaaaatgatggcaaaatatcccaacatctgcaaatatgtgcacctgcct
gtacaaagcggaagcaatgccatcctcaaagcgatgaaccgccagcacacacgcgaggaa
tatttagacctcattaaacaagccaaagccattgtgccagacatcgccttttcccaagat
atgattgcaggcttctgtggcgaaaccgagcaagaccaccaagacactttatctttgatg
aaagaggtggaatacgactatggctatatgttcgcgtactcggaaagacctggcacgcct
gcccataaaaaaatggaagatgatgtgcctgccgaggttaaaaaacgccgactgcaagag
atcatagacctacaaggagaactctccagaaagcggatgaaatcttatgtagggcgcacc
cacgaagtcctcatagagggagaaagcaagaaagataaaaaccaatggaaaggcagaaat
tcccaaaatgcagtagtggtttttgacaaagccgaaggacaaaacatcggcgatttagta
gaggttttcgtgtatgacaacacccaaggaacgctcttgggaagaataaactaa
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