Riemerella columbina: NYR17_01855
Help
Entry
NYR17_01855 CDS
T09247
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_01855
Transporters [BR:
rcl02000
]
Other transporters
Pores ion channels [TC:
1
]
NYR17_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OMP_b-brl
DUF6089
bMG3
Motif
Other DBs
NCBI-ProteinID:
WKS95508
LinkDB
All DBs
Position
406245..407690
Genome browser
AA seq
481 aa
AA seq
DB search
MKNLKLGISALALAVATTVSAQTTSNPWLIGVGAHGVNHVAAGGNAGDVIKTAFSGKDLY
NINNYTITPPLSKLTVARNLGKALVIDWQTSVGNVDNKRVGMDKEFMLMTGLGLQLKIAG
LFGNEELWFDPYVRVGANYLRHDYSGVAAAVNDKNENIGKNHFALATGLGTNIWLTKNFG
LGIQGDYVSTPTDNSSIANFWQASATLNFRFGNNDRDKDGVLDKDDLCPDTPGLVEFQGC
PDTDGDGVPDKDDNCPDVAGPVDNNGCPWPDTDGDGVLDKDDACVDVAGPAENNGCPWPD
TDGDGVLDKDDKCPNVPGLAEYQGCPKPQEAFALEATGALKGIFFNFNKASIRPESNGKL
DQAAEIIKSSNGGTFLVTGHTDAKGNANYNLKLSRERAAAVVSALEARGVNGAQLKSRGV
GATEAKVPATASDAERMADRKVVVSAVSGAAWEALEKSDLPVVKKKVVKKSTKKATKRRR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaaaattaggaatttcagcattagcattagctgtagcgactacagtgtct
gcacagacgaccagcaacccgtggttaatcggagttggtgctcacggtgtaaaccatgta
gcagcaggcggtaatgcaggagatgttattaaaacagcgttctcaggtaaagatttgtat
aatattaacaattatacaatcacaccaccactttcaaaattaacagtggcgagaaattta
ggaaaagctttagttatcgactggcaaacttccgtagggaatgttgataacaaaagagta
ggaatggacaaagaatttatgttgatgactggtcttggtcttcagcttaaaattgctggt
cttttcggaaacgaagaattatggtttgacccatatgtgagagtaggtgctaactactta
agacacgattactctggtgtagctgctgctgtaaatgataaaaacgaaaatatcggtaaa
aatcactttgctttagctacaggtttaggtactaacatttggttaactaaaaactttggt
ttaggtatccaaggagactatgtatctacaccaacagataactcaagcattgctaacttc
tggcaagcttctgctactttaaactttagatttggtaacaatgatagagataaagatggc
gtacttgataaagatgacctttgcccagatactccaggtttagtagagttccaaggatgt
cctgatactgatggtgatggcgttccagataaagatgataactgtccagatgtagccgga
ccagtagataacaatggttgtccttggccagatactgatggagatggtgttcttgacaaa
gacgatgcttgtgtagatgttgcaggtcctgctgaaaacaacggttgtccttggccagat
actgatggagatggtgttcttgataaagatgataaatgtccaaatgtaccaggtttagct
gaataccaaggatgtcctaagccacaagaagctttcgctttagaagctacaggagctctt
aaaggtatcttctttaactttaacaaggcttctatcagaccagagtctaacggtaaatta
gaccaagcggctgaaatcatcaaatcttctaacggtggtactttcttagtaacaggtcac
actgatgctaaaggtaacgctaactacaacttaaaactttcaagagaaagagctgcagct
gtagtatctgctttagaagcaagaggtgttaacggtgctcagttaaaatcaagaggtgta
ggtgctacagaagctaaagttcctgctacagcatctgacgctgaaagaatggctgacaga
aaagtagtagtatctgcggtaagtggtgctgcttgggaagctcttgagaaatctgacctt
ccagttgttaagaaaaaagtagttaaaaaatctactaaaaaagcaacaaaaagaagaaga
aaataa
DBGET
integrated database retrieval system
