Riemerella columbina: NYR17_02120
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Entry
NYR17_02120 CDS
T09247
Name
(GenBank) aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
rcl
Riemerella columbina
Pathway
rcl00020
Citrate cycle (TCA cycle)
rcl00630
Glyoxylate and dicarboxylate metabolism
rcl00640
Propanoate metabolism
rcl00720
Other carbon fixation pathways
rcl01100
Metabolic pathways
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
rcl01210
2-Oxocarboxylic acid metabolism
rcl01230
Biosynthesis of amino acids
Module
rcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rcl_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NYR17_02120
00630 Glyoxylate and dicarboxylate metabolism
NYR17_02120
00640 Propanoate metabolism
NYR17_02120
09102 Energy metabolism
00720 Other carbon fixation pathways
NYR17_02120
Enzymes [BR:
rcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
NYR17_02120
4.2.1.99 2-methylisocitrate dehydratase
NYR17_02120
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
AcnX
Motif
Other DBs
NCBI-ProteinID:
WKS95557
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Position
451529..453799
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AA seq
756 aa
AA seq
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MTFDLDMIKRVYTDFENRVNEARAFMGRPLTYSEKILCAHLFKGQKPEAFKRGESYVDFA
PDRVAMQDATAQMALLQFMQAGKTKVAVPSTVHADHLIQARVGADKDLQEAENKNNEVYQ
FLQSVSNKYGIGFWKPGAGIIHQVVLENYAFPGGMMIGTDSHTPNAGGLGMVAIGVGGAD
AVDVMAGMPWELKFPKMIGIKLTGKLSGWTAPKDVILKVAGILTVKGGTGAIVEYFGEGA
EALSCTGKGTICNMGAEIGATTSIFAYDENMSQYLRSTDRADLADAADAIKHVLRADAEV
YENPEQYYDQVIEINLSELEPHLNGPFSPDIATPISQMKEIAEKNGWPTKVEVGLIGSCT
NSSYEDISRAASVAKQAKEKNLKVAAEYTITPGSEQVRYTVERDGYLDTFDQIGGKVFAN
ACGPCIGQWAREGAEKQEKNTIVHSFNRNFSKRADGNPNTYAFVASPELVTALAIAGDLT
FDPRKDKLKNENGEEVLLDEPQGFELPPRGFDVDDPGYIAPAEDGSKVEVIVSPESDRLQ
LLEAFPAWDGNNVYGVRLLIKAYGKCTTDHISMAGPWLKYRGHLDNIANNTLIGAVNAYN
METNKVKNELNGEYMEVPASARAYKKAGVKTIIVGDNNYGEGSSREHAAMQPRHLGVMAV
LVKSFARIHETNLKKQGMLALTFANEADYDKIQEDDTFNFIDLQDFEPAKPLTIEVVHAD
GSKDTIMANHTYNEGQIAWFRAGSALNLIKQEQENK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgacttagatatgattaagcgcgtttacactgattttgaaaacagagtaaac
gaagccagagcctttatggggcgccctcttacttattctgaaaaaattctttgtgcccac
ttatttaaaggccaaaaaccagaagcatttaaaagaggagaatcttatgtagattttgca
ccagatagagtagcgatgcaagatgccacagcacagatggcattgctccaatttatgcaa
gctggaaaaaccaaagtggcagtgccttctacagtgcacgcagaccacttgatccaagcc
agagtaggcgctgataaagatttacaagaagctgaaaacaaaaataacgaggtttaccaa
ttcctacaatcggtgtctaataaatacggcattggcttctggaagccaggggcagggatt
atccaccaagtggtattagaaaactatgcattcccaggtgggatgatgattggaaccgac
tcccacacgccaaatgcaggtggtctcgggatggtggcgattggtgtaggtggtgccgat
gcggtagatgtaatggcaggaatgccttgggagcttaaattcccgaaaatgatagggatt
aaacttacaggtaaactaagcggttggacagctcctaaagatgtgattctaaaagtagcg
ggcatccttacggtaaaaggaggtacaggcgctattgtagaatattttggcgaaggtgcc
gaggcgctttcttgtactggtaaaggaactatttgtaatatgggagcggagattggtgcc
acgacttctattttcgcttatgatgaaaatatgagccaatacttgcgttctaccgataga
gcggatttagctgatgcagccgatgccatcaagcatgtactccgtgctgatgctgaggtt
tatgaaaatccagagcaatattacgatcaagtgatagaaatcaacctttcggaattagaa
ccacatttgaacggccctttctctccagacatcgcgacgccaatttctcaaatgaaagaa
attgcggagaaaaacggatggccaaccaaagtagaggtcggtttaattggctcttgtacc
aactcttcttatgaagatatttctcgtgccgcttccgtagcgaaacaagccaaagaaaaa
aatctaaaagttgctgcagaatataccattacgccagggtctgagcaagtaagatacacc
gtggaaagagacggctatttggatacttttgatcaaattggaggtaaagtatttgccaac
gcttgtggtccttgtattggtcagtgggcgagagaaggcgctgaaaaacaagagaaaaac
accattgtacactcgttcaacagaaacttctctaaaagagccgatggtaaccctaatact
tacgctttcgtggcatcgccagagttggtaacggcactggctatcgctggagatttaact
tttgatccaagaaaagacaaacttaaaaacgaaaacggcgaggaagttcttttagatgaa
cctcaaggttttgagttgcctccaagaggttttgatgtagatgatccaggttacattgca
ccagccgaagatggttctaaggtggaagtgattgtttctccagaatctgaccgtcttcag
ttgttagaggcgttcccagcgtgggatggtaataatgtctatggtgtgaggttgctcatc
aaggcttatggtaaatgtacaaccgaccacatttctatggcgggaccttggttgaagtat
agagggcatttggataacatcgcgaacaatacccttatcggtgcggttaatgcatacaat
atggaaaccaacaaagtgaaaaacgagctgaatggtgagtatatggaggtgccagcatca
gcgagagcttataaaaaagcaggcgttaaaaccattatcgttggggataacaactatggt
gaagggtcttctcgtgagcacgcagcgatgcagccgagacaccttggtgtaatggcggta
ctggtgaagtcattcgcgcgtatccacgaaaccaaccttaaaaaacaaggtatgttagcc
ttgacctttgctaatgaggctgattacgataaaatccaagaagatgatactttcaacttt
atagatttgcaagactttgagccagcgaaaccattgactattgaagtggtacacgctgat
ggttctaaagatactattatggcaaaccatacatataacgaagggcaaattgcttggttt
agagcaggttctgctttaaatttgattaagcaagagcaagaaaataaataa
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