Riemerella columbina: NYR17_02425
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Entry
NYR17_02425 CDS
T09247
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
rcl
Riemerella columbina
Pathway
rcl00920
Sulfur metabolism
rcl01100
Metabolic pathways
rcl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
NYR17_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcl03400
]
NYR17_02425
Enzymes [BR:
rcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
NYR17_02425
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
NYR17_02425
DNA repair and recombination proteins [BR:
rcl03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
NYR17_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WKS95616
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All DBs
Position
512141..513151
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AA seq
336 aa
AA seq
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MFTPQEISTIKSLLVPQSKVVIITHYNPDGDAIGSSLGLKHFLRTLDIEAEVIVPNDFPK
FLKWMPEAKKITVAEWKKKKSSELIRHADVVFCLDFNTLSRIGAVGEWVAATKAVKVLID
HHQQPDAFDFVYSDTSIPATSQMVYHFIEALGGVDRVNQEVASCLYTGIMTDTGGFRFRS
TSATTHRIIAHLIEHGADPATISSNTWDTNSLSRLQLLALVLGRIELVKNGEVAIIWLKR
EELKAYGFQKGDTDGFVNYGLSILGTKMAAFFMEDLYEDFIKISFRSKGDVDVNQLARQY
FNGGGHINAAGGKYYKTIEETIEDFKECVEREDFTF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacctcaagaaatttcaacgataaaatcattattagtaccgcagagcaaggtg
gtcatcatcacccattataacccagatggtgatgctataggctccagccttgggcttaaa
cacttcctacgaacactggatatagaggcggaagtgattgtccccaacgattttccgaaa
tttctaaaatggatgccagaggcaaaaaaaattacagtagcggaatggaagaagaaaaaa
tcttcagagctgattcgccacgcagatgtggtattttgcttagattttaacaccctttcc
agaattggtgcagtgggcgagtgggtggcagcaaccaaagccgtaaaagtgctcatagac
caccaccaacagccagatgcgtttgattttgtttattctgatacttccatccctgccaca
tcgcagatggtataccattttattgaagcgctgggcggtgtagatcgggttaaccaagag
gtagcgagctgtctctacactgggattatgacggatacaggcggttttagattccgctct
accagtgctaccactcacaggattattgcccatttaatagaacacggcgccgaccctgca
accatttcttccaacacttgggataccaattctctgtccagactacagcttttagcattg
gtgctggggcgtatagaattggtaaaaaatggtgaagtagcgataatttggctcaagcgt
gaggaactgaaagcttacggcttccaaaaaggcgatacagatggttttgtcaattatgga
ttgagcattttgggaactaagatggcggcgttttttatggaagatttatatgaagatttt
atcaaaatatcattcagaagcaaaggcgatgtagatgtgaaccaactggcgcgccaatat
tttaatggaggtgggcacatcaatgctgcaggtggcaaatactataaaacgatagaagaa
acgatagaagattttaaagaatgcgtagagcgtgaggattttactttttag
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