Riemerella columbina: NYR17_02695
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Entry
NYR17_02695 CDS
T09247
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_02695
01504 Antimicrobial resistance genes [BR:
rcl01504
]
NYR17_02695
Transporters [BR:
rcl02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
NYR17_02695
Antimicrobial resistance genes [BR:
rcl01504
]
Gene variants
Tetracycline resistance genes
Transporters
NYR17_02695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
DUF5455
Motif
Other DBs
NCBI-ProteinID:
WKS95668
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Position
562910..564127
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AA seq
405 aa
AA seq
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MHRSKKSAAIGFIFITLLIDITGWGIIIPVVPKLIEELIHGDISQASQYGGWLSFVYAVM
QFIFASVLGNLSDRYGRRPVILFSLLGFSANFFLQAWAPTIMWLFVGRILSGITGASVTT
ASAYIADISTEEDRSKNFGMIGAAFGLGFIIGPVLGGVLGQYGARVPFFAAGILCLINFV
YGYFVLPESLSVENRRAFNWKRANPIGSLLQLKKYPELLGLFSAWFLIYIAGHAVQTNWA
YFGMYRFHWNETTVGISLGVMGALTALVQGVLLRKINPKLGNQRSILYGIMMYGLGMLLF
AFAGQSWMMFAILFIYCLGGIAGPSLQSVISAQVPANEQGDLQGALTSMISLTSIIGPPL
MTNVFYYFTHSEAPFQFPGAPFFLGFLLITVSIVVVYYVFQKNKR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtcaaagaaatctgcagccataggctttatttttatcactttacttattgat
attacggggtgggggattatcattcccgttgtcccgaagttgatagaggaactgatccac
ggagatattagccaagcctctcagtatggcggttggttgagttttgtttatgccgtaatg
cagtttattttcgcctccgttttagggaatttgagtgaccgctatgggcggcgacccgtt
attttgttttcgctcttgggcttttcagcaaatttcttccttcaagcgtgggcacctacc
attatgtggctgtttgtggggcgtattttgtcagggattacaggcgccagcgttaccaca
gcgagtgcctacatcgcggacatcagcaccgaagaagaccgctccaaaaactttgggatg
attggtgccgccttcggtttgggctttattatagggcctgtgctgggcggtgtgctgggg
cagtatggcgcaagggtgcctttttttgccgcggggatcttgtgtttaatcaattttgtg
tatggttattttgtgttgccagaaagcctttcggtggaaaatcggcgggcgttcaattgg
aagcgtgccaaccccatcggttctttattgcaactgaaaaaatatccagagcttttgggg
ctcttttcggcttggtttttaatctacattgcagggcacgccgtgcagaccaattgggct
tattttggaatgtaccgtttccattggaacgaaaccacggtgggcatttccttaggcgtt
atgggcgccctcacagcattagtccaaggcgtccttttgagaaaaatcaacccaaaattg
ggcaaccagcggagcattctctatggcattatgatgtatggtttagggatgttgctgttc
gcatttgcggggcaaagctggatgatgtttgccatactctttatttattgtttagggggt
attgcaggaccttcgttgcagtcggttatttcggcacaggtgccagccaatgaacagggc
gacctccaaggggcgctaaccagtatgattagcttgaccagcattattgggccaccgctg
atgaccaatgtcttttattattttacccacagcgaagcgccttttcagttccctggagcg
ccgtttttcctcggatttttactgataacggtgagtatcgtggtggtatattatgtattt
cagaaaaataaacggtaa
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