Riemerella columbina: NYR17_02925
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Entry
NYR17_02925 CDS
T09247
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
NYR17_02925
Enzymes [BR:
rcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NYR17_02925
Peptidoglycan biosynthesis and degradation proteins [BR:
rcl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NYR17_02925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
WKS95712
LinkDB
All DBs
Position
611673..612053
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AA seq
126 aa
AA seq
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MMKRAILVIIMMISFGGLYSFKNSESNLAGTTYASYYHDKFNGRKTASGEIFDNTELTAA
NKRLPFGTLVEITNLRTGKSVVVKVNDRGPYAKGRSFDLSKAAFNAIGNHKRGTMPITYR
VIGQED
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagagccattctcgtaatcataatgatgatttctttcggaggattatattcg
tttaaaaacagcgagtctaatttagcgggcaccacttatgcttcctactatcacgacaag
ttcaatggtagaaaaaccgccagcggagagatttttgataatacagagctaaccgctgcc
aacaaaagattaccattcggtaccttggtagaaattaccaacctgaggacagggaaaagt
gtcgtggtaaaagtgaacgatagaggaccttatgccaaaggacgctcgtttgacctgagc
aaagcagcctttaacgccataggaaaccacaaaagaggcactatgccgattacttatcgc
gtgatagggcaagaagattaa
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