Riemerella columbina: NYR17_03000
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Entry
NYR17_03000 CDS
T09247
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
rcl
Riemerella columbina
Pathway
rcl00740
Riboflavin metabolism
rcl00790
Folate biosynthesis
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
NYR17_03000 (ribB)
00790 Folate biosynthesis
NYR17_03000 (ribB)
Enzymes [BR:
rcl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
NYR17_03000 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
NYR17_03000 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Pro_dh
DUF6252
LptF_LptG
Rho_N
Motif
Other DBs
NCBI-ProteinID:
WKS95723
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All DBs
Position
627524..628645
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AA seq
373 aa
AA seq
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MSEIQLNTIPEALEDLKNGKIIIVVDDENRENEGDFLSAAELTTPEIINFMSTYGRGLIC
TPLPEERCDELGLDIMVTRSSDPKETAFTVSVDLLGEGVSTGISASDRAKTILALMNENT
KPTAFMKPGHIFPLRAKKGGVLKRAGHTEAAIDLTKLAGLKEGGVICEIMNDDGSMARLP
QLVELAKKHQLKIISIEDLIEYRLRKGDLVHKIEEREVETIYGNFTFHAFQEKHTEQIHF
AFTKGEWTEDEPILVRVQSSSAYFDVLSRLISGEKPLLKKVTDMINEAGKGAIIFINNVS
NAEHTMRKLQQFLDYQDGQVQRPTLSANYMEYGVGTQILKHLGITKFRVITQNPQQKPVI
SGYDVEVTEMVQL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatccaactcaataccattccagaagctttagaagacctaaaaaacgggaaa
atcatcattgtagtagatgatgaaaaccgcgagaacgaaggcgatttcctttcggcagcg
gagctgaccaccccagagattatcaactttatgtccacatatggccgtggtttaatctgc
acaccactacccgaagagcgctgtgatgagttggggctggatattatggtcacgcggagt
agcgaccctaaggaaaccgcatttaccgtttccgtagatttattgggcgagggcgtttcc
acagggatttctgccagcgacagagccaaaaccattttggcactgatgaatgaaaacacc
aagcctaccgcctttatgaaacctgggcacatcttcccactaagagccaaaaaaggaggc
gtactcaaaagagcgggccacaccgaagcggcgatagaccttaccaagttggcagggctt
aaagaaggaggcgttatctgcgagattatgaatgatgacggttctatggcgcgtctccct
cagttggtagagctcgcgaaaaagcatcagctcaaaatcatttctatagaagatttaata
gaataccgcctcagaaaaggcgatctggttcataagatagaagaacgcgaggtggagacc
atctatggcaacttcacattccacgcattccaagaaaaacataccgagcaaatccatttt
gcctttaccaaaggagagtggacagaagatgagcctatattggtcagagtgcagagttcc
agcgcctattttgatgtccttagccgactgatttcaggggaaaaaccactactcaaaaaa
gtgaccgatatgattaacgaggcaggcaagggcgctattattttcatcaataatgtctct
aatgccgagcatacgatgcgcaagctccaacagtttttagactaccaagatggccaggtg
cagcgccctacgttgtcggctaactatatggaatacggcgtgggtacccagattttgaag
catttgggcattaccaaatttagagtgataacccagaacccacaacagaaacccgtcata
tctggttatgatgtggaggtgacggaaatggtgcaactttaa
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