Riemerella columbina: NYR17_03750
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Entry
NYR17_03750 CDS
T09247
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcl03016
]
NYR17_03750 (truB)
Enzymes [BR:
rcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NYR17_03750 (truB)
Transfer RNA biogenesis [BR:
rcl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NYR17_03750 (truB)
Prokaryotic type
NYR17_03750 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WKS95856
LinkDB
All DBs
Position
complement(781355..782041)
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AA seq
228 aa
AA seq
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MNLEDLQAGQILLIDKPLDWTSFQAVNKIKFGIKRAFKIKKIKIGHAGTLDPRATGLLIV
CTGKATKQIPQIQDAPKEYIAEIKLGAQTASYDTEEPEIHHQPIDHLTAEMIENAILSFV
GEIEQTPPIFSAIKIDGERAYHLARAGETVKMKSRKTTIHYIKDLSIALPLVRFTVGCAK
GTYIRSLAHDIGQKLGVGAYLTNLRRTKIGEYHISDANTNYLDKDFKF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagacctacaagctggacagatcctcctgattgacaagcccttagactgg
acttctttccaagcggtgaataaaattaaattcggtattaaaagggcgtttaaaatcaaa
aaaattaaaataggacacgcaggaacgctggaccccagagccacagggcttctcattgtt
tgcacgggcaaagccaccaaacaaattccgcaaatacaagatgcccccaaggaatacatc
gcggaaattaaactaggcgcccaaactgcttcttacgacaccgaggagcctgaaatccat
catcagcccatagaccacctaacggcggaaatgatagaaaatgccatcttgagtttcgtg
ggggaaattgagcaaacgccgcccattttttccgctatcaagatagatggtgagcgcgct
taccacttagcgagagcaggcgaaaccgttaaaatgaaatcccgaaaaactaccattcat
tatattaaagacctcagcatcgccttgccattggtgcgttttaccgtaggttgcgccaag
ggcacttacatccgaagtttggcacacgatattggacagaaattaggagtgggcgcctat
ctcaccaacctcagacgcactaaaattggggaatatcatatctccgatgccaataccaat
tatcttgataaagattttaaattctaa
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