Riemerella columbina: NYR17_04305
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Entry
NYR17_04305 CDS
T09247
Symbol
tet(Q)
Name
(GenBank) tetracycline resistance ribosomal protection protein Tet(Q)
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rcl01504
]
NYR17_04305 (tet(Q))
Antimicrobial resistance genes [BR:
rcl01504
]
Gene variants
Tetracycline resistance genes
Others
NYR17_04305 (tet(Q))
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFG_III
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
AIG1
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
WKS95961
LinkDB
All DBs
Position
complement(894336..896261)
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AA seq
641 aa
AA seq
DB search
MNIINLGILAHIDAGKTSVTENLLFASGATEKCGRVDNGDTITDSMDIEKRRGITVRAST
TSIIWNGVKCNIIDTPGHMDFIAEVERTFKMLDGAVLILSAKEGIQAQTKLLFSTLQKLQ
IPTIIFINKIDRAGVNLERLYMDIKTNLSQDVLFMQTVVDGSVYPVCSQTYIKEEYKEFV
CNHDDDILERYLADSEISPADYWNTIIALVAKAKVYPVLHGSAMFNIGINELLDAISSFI
LPPASVSNRLSAYLYKIEHDPKGHKRSFLKIIDGSLRLRDVVRINDSEKFIKIKNLKTIY
QGREINVDEVGANDIAIVEDIEDFRIGDYLGAEPCLIQGLSHQHPALKSSVRPDKPEERS
KVISALNTLWIEDPSLSFSINSYSDELEISLYGLTQKEIIQTLLEERFSVKVHFDEIKTI
YKERPIKKVNKIIQIEVPPNPYWATIGLTLEPLPLGTGLQIESDISYGYLNHSFQNAVFE
GIRMSCQSGLHGWEVTDLKVTFTQAEYYSPVSTPADFRQLTPYVFRLALQQSGVDILEPM
LYFELQIPQAASSKAITDLQKMMSEIEDISCNNEWCHIKGKVPLNTSKDYASEVSSYTKG
LGIFMVKPCGYQITKDGYSDNIRMNEKDKLLFMFQKSMSLK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaatattataaatttaggaattcttgctcacattgatgcaggaaaaacttccgtaacc
gagaatctgctgtttgccagtggagcaacggaaaagtgcggccgtgtggataatggtgac
accataacggactctatggatatagagaaacgtagaggaattactgttcgggcttctacg
acatctattatctggaatggagtgaaatgcaatatcattgacactccgggacacatggat
tttattgcggaagtggagcggacattcaaaatgcttgatggagcagtcctcatcttatcc
gcaaaggaaggcatacaagcgcagacaaagttgctgttcagtactttacaaaagctgcaa
atcccgacaattatatttatcaataagattgaccgtgccggtgtgaatttggagcgtttg
tatatggatataaaaacaaatctgtcgcaagatgtcctgtttatgcaaactgttgtcgat
ggatcggtttatccggtttgctcccaaacatatataaaggaagaatacaaagaatttgta
tgcaaccatgacgacgatatattagaacgatatttggcggatagcgaaatttcaccggct
gattattggaatacgataatcgctcttgtggcaaaagccaaagtctatccggtgctacat
ggatcagcaatgttcaatatcggtatcaatgagttgttggacgccatttcttcttttata
cttcctccggcatcagtctcaaacagactttcagcttatctctataagatagagcatgac
cccaaagggcataaaagaagttttcttaaaataattgacggaagtctgagacttcgagac
gttgtaagaatcaacgattcggaaaaattcatcaagattaaaaatctaaagactatttat
cagggcagagagataaatgttgatgaagtgggtgccaatgatatcgcgattgtagaagat
atagaagattttcgaatcggagattatttaggtgctgaaccttgtttgattcaaggatta
tcgcatcagcatcccgctctcaaatcctccgtccggccagacaagcccgaagagagaagc
aaggtgatatccgctctgaatacattgtggattgaagacccgtctttgtccttttccata
aactcatatagtgatgaattggaaatctcgttatatggtttgacccaaaaggaaatcata
cagacattgctggaagaacgattttccgtaaaggtccattttgatgagatcaagactatc
tacaaagaacgacctataaaaaaggtcaataagattattcagatcgaagtaccacccaac
ccttactgggccacaatagggctgactcttgaacccttaccgttagggacagggttgcaa
atcgaaagtgacatctcctatggttatctgaaccattcttttcaaaatgccgtttttgaa
gggattcgtatgtcttgccaatctggtttacatggatgggaagtgactgatctgaaagta
acttttactcaagccgagtattatagcccggtaagtacacctgctgatttcagacagctg
accccttatgtcttcaggctggccttgcaacagtcaggtgtggacattctcgaaccgatg
ctctattttgagttgcagataccccaagcggcaagttccaaagctattacagatttgcaa
aaaatgatgtctgagattgaagacatcagttgcaataatgagtggtgtcatattaaaggg
aaagttccattaaatacaagtaaagactatgcatcagaagtaagttcgtacactaagggc
ttaggcatttttatggttaagccatgtgggtatcaaataacaaaagacggttattctgat
aatatccgcatgaacgaaaaagataaacttttattcatgttccaaaaatcaatgtcatta
aaataa
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