Riemerella columbina: NYR17_04370
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Entry
NYR17_04370 CDS
T09247
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_04370
Transporters [BR:
rcl02000
]
Other transporters
Pores ion channels [TC:
1
]
NYR17_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WKS95973
LinkDB
All DBs
Position
complement(907326..909545)
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AA seq
739 aa
AA seq
DB search
MKKHFITLGLLSVSTLAFGQHKKIDTLKVQQIEDVNLHKTGNPNKAKALTTKTNLSVMDT
PQPIAIVTHEIIEQQQAKQLSEVLQNVNGLYVTSARGGSQDSFGGRGFNFGNDNIFKNGS
RVNSGAFPEVSGLERVEVLKGANAMLYGNVAPGGIVNMITKKPRFNFGGSIGMNVGSWNN
YKPTVDLYGPLSDKVAYRVNGTYEYADSFRDVVNNQKYYFNPSFLFNIGSKTQLIVEADY
LKNNFTPDFGLGSITDKKDGSYKINDLVPISTFFGADWQFQNVQQTTSTITLNTEVAENW
LLNAVASYQNYVKDYFSTERIQWSYDSNIPNDRIKWDRPLNRTYNENNYASLQFNLNGSF
KTGDVVHKILIGTDGDYQNVDSYTYDNPKKYGTNGSITNATIYLDDPSTWTSGAEIKGLN
TIGKVRIPTQRFGFYAQDFIELSKEFKVLAGLRWSYLENKSSIKTDFKTGNTTETAGTVD
RAFSPKAGLVYTPNKHLTIFGTYTNSFSPNSGRTIYDEALKPSIIDQFEIGMKKDFWDNA
VALNLSLYQITNRNAYQTAEFDKNGNPNSDRYVREFAGKMRSRGVELDITGNPMPNLSLI
GGFSYNHSVYTETPDDFGYVENQRLVRTPATTANASVFYTFTKGIKGLKLGATLYYIGDR
IAGWNDTKKTLKDRNNVSRLMELDDYTTVALSAGYSWDKFSIQAKVGNLFNTKNYVVHEN
YSVNPLTPRNFYVTVNYKL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatttcattactttaggactactttccgtgtctacccttgcttttgggcaa
cataaaaaaatagatacgctgaaagtacaacagatagaagatgtaaacctccacaaaaca
ggcaatccgaacaaggctaaagcgctgaccaccaaaacgaatctcagcgtgatggatacg
ccgcagccgatcgccattgttacccacgaaattatagagcaacagcaagccaagcaactt
agcgaggtgctccagaatgtgaatggactctatgtgacctctgcacgaggcggctctcag
gacagttttggtggtagaggcttcaactttggtaatgataatattttcaaaaatggctct
cgcgtgaacagtggtgcctttccagaagtttctggtttagagcgtgtggaagtgcttaaa
ggggctaatgcgatgctctatggtaatgtggcgccaggcggtattgttaatatgattacc
aaaaaaccgagatttaatttcgggggttctatcgggatgaatgttggcagctggaacaac
tacaaaccgactgtagacctctacggccctcttagcgacaaggtggcgtatcgtgtgaat
ggaacttatgaatatgccgacagcttccgagatgtggtaaacaatcaaaaatattacttc
aacccatcgtttctctttaatattggctctaaaacacaattgattgtagaggcggattac
ctcaaaaataactttacccctgattttggtttagggagcatcaccgataaaaaagatggc
agctataaaatcaatgatttggtgccgatcagtactttcttcggcgcagattggcagttc
caaaatgtacagcaaaccacttctaccattaccctcaatacagaagtagcagaaaattgg
ctccttaatgctgtggcatcttaccaaaattatgtgaaggattatttctccacagagcgt
atccaatggagttatgattccaatattccaaacgacagaattaaatgggatagaccgctc
aacagaacttataacgaaaataattatgcctcgttacagttcaacctcaatggctctttt
aaaacaggcgatgtggtgcataaaatcttaatcggtaccgatggcgattatcaaaatgta
gattcttacacctacgacaaccctaaaaaatacggcactaacggtagcattaccaacgcc
accatctatttagatgacccaagcacttggacaagcggtgcggaaatcaaagggctcaac
accattggtaaagtgagaattccgacccaaagatttgggttttatgctcaagatttcatc
gagctgagcaaagaatttaaagttttagctggcttaagatggtcttatttagagaataaa
tcaagcatcaaaacagattttaaaactggaaataccacagaaactgcaggcaccgttgac
cgtgctttttcgccaaaagcgggcttggtctatacgcctaacaagcacctaacgattttc
ggtacttataccaactctttctcgccaaactctggaagaacgatttatgatgaagcgctc
aagccgtccattatcgatcaatttgaaatcgggatgaagaaagatttttgggataatgcg
gtggcgctcaacttatcgctctaccaaattaccaaccgaaatgcctaccaaaccgccgag
tttgacaaaaatggcaaccctaacagcgatagatatgttcgtgaatttgctggaaaaatg
agaagccgcggcgtggagttagacattacgggtaacccaatgccgaacctttccctcatc
ggaggtttctcttacaaccactccgtttataccgaaacgccagatgatttcggttatgtg
gaaaaccaaagattggttagaacgcctgctaccacggctaatgcatcagtattctatacc
tttacgaagggcatcaaaggtttaaaattaggcgctacgctctactacatcggcgataga
attgctggatggaacgacactaagaaaacgctaaaagaccgtaataatgtgagccgcctc
atggaattagatgactacaccaccgtggcgctttctgcgggttactcttgggataaattt
agcatccaagcgaaagtgggtaatttattcaacaccaaaaactatgtggtgcatgagaat
tattccgttaaccccctcacgccgagaaacttctatgttacggttaactacaagctctaa
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