Riemerella columbina: NYR17_04430
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Entry
NYR17_04430 CDS
T09247
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_04430
Transporters [BR:
rcl02000
]
Other transporters
Pores ion channels [TC:
1
]
NYR17_04430
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Tudor_4
Motif
Other DBs
NCBI-ProteinID:
WKS95985
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Position
920746..922569
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AA seq
607 aa
AA seq
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MKKCILSIVLLGIYSGLSAQTQPQEKPIDEVIITGKFLDLPYKKVNENIEIITQKEIQQS
PARSIDELLQEVAGMDIRRRGANGVQSDVSIRGGSFDQVLVLINGIRMNDSQTGHNNMNF
PVDLASIERIEVVKGPAASRFGQNAYAGVINIVTKTKIGKEITVKAEGGDFSTYDLGLTA
RYGNEKQSHLFQANTFSTEGYRYNTDAKINQVFYQNQFNIKDGAIKFQAGFSEKKFGANG
FYANSKFEDQYEETQASIVSVAYQQKLGAWGLNANTYWRRGQDEYLLFREKPEIYRNHHI
GNNIGGEVNASYQSDLGTTGLGVELRKEFFVSYNNKPANSMGDRERLVTQLFFEHHFSFI
QNKLQVSPGISWANYGKEGNFFYPGLNVGYQITPQHKIYGGVAKVHRIPTFTDLYYVSGT
DQGNPDLKPESAISSEVGYLFSGKTASFKLSGFMKHSSDAIDWVKQNPNDLWNVQNIGDI
KTKGVEVSLNQQVAPWLKCQVSYTYLDNEYKNAQNLLSKYALENLKHQLIGKVNINFTKN
LSNEWVYRYSERVNLGSYNLLDAKLSFHQEAYNLYLLVNNITNTDYMEVTVPMPKRWFHI
GVSYTIK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatgcattttaagcatcgtgctgttgggcatttatagtggactttcagcacaa
acacaaccacaagaaaaaccaatagatgaggttatcatcacaggtaaatttttagattta
ccttataagaaagtgaatgagaatatagaaatcatcacgcagaaagagatccagcaatcg
ccggcacgtagcattgatgaacttctgcaagaagtggcagggatggacatccgtcgccgt
ggtgccaatggggtgcagagtgatgtttctatccgcggaggctcttttgaccaagttttg
gtactcatcaacgggattagaatgaacgactcccaaacgggacataacaatatgaatttc
cctgtagatttagcctctatagagcgtatagaagtggttaaaggccctgcagcaagccgt
tttggacagaatgcttatgcgggagtcatcaacattgttacgaaaactaaaatcggtaaa
gagattactgtaaaagccgaaggcggcgatttttctacctatgatttaggtttgaccgcc
agatatggcaatgaaaaacaatcgcatctattccaagccaacaccttctccaccgagggg
tatcgctataataccgatgcgaaaatcaatcaagttttttatcaaaaccagttcaatatt
aaagatggtgccatcaaatttcaagctgggttttcggaaaagaaatttggtgccaatggt
ttttatgccaacagtaaatttgaagatcaatatgaggaaacgcaagcttctatcgtgagt
gtggcgtatcagcaaaagttgggcgcttgggggcttaatgccaatacttactggcgcaga
gggcaagatgaatatttgttgtttagagagaaaccagaaatttaccgcaaccatcacatc
ggcaataatattggtggcgaggtgaatgccagctatcagtcagatttaggaaccacaggg
ctgggcgtagagctgagaaaggaattttttgtaagctataacaacaagcctgccaacagt
atgggcgatagagagcgcttggttacgcagttgttttttgagcatcatttttcttttatt
caaaacaaattgcaggtgtcaccaggaatttcttgggcgaattatggcaaggagggcaat
ttcttctatccagggttaaatgtggggtatcagattacaccacagcacaaaatttatggt
ggtgttgctaaggtgcaccgcatcccaacttttaccgatttgtattacgtcagtggtacg
gatcaaggcaatccagacttgaagccagaaagtgccatttcatcagaggtgggctatctt
ttcagtggcaaaacagcgagtttcaaactcagtggatttatgaagcactcatctgatgcg
atagattgggttaagcaaaatcctaatgatttatggaatgtgcagaacattggcgatatt
aaaaccaaaggggtagaagtgtcattgaatcagcaagttgcaccgtggctgaagtgtcaa
gtgagctatacttaccttgataatgagtataaaaatgctcaaaatctattgtcaaaatac
gccttagagaatttaaaacatcaattgattgggaaagtgaatatcaatttcactaaaaac
ctttctaatgagtgggtgtaccgttattcagagcgggttaatttgggcagttataacttg
ttagatgccaaattatctttccatcaggaggcttataacctttatcttttggttaataac
atcaccaatacagactatatggaagtcacagtgcctatgccgaagcgttggttccacatt
ggagtgagttataccattaaataa
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