Riemerella columbina: NYR17_04440
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Entry
NYR17_04440 CDS
T09247
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rcl
Riemerella columbina
Pathway
rcl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NYR17_04440 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcl01007
]
NYR17_04440 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcl03016
]
NYR17_04440 (pheT)
Enzymes [BR:
rcl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
NYR17_04440 (pheT)
Amino acid related enzymes [BR:
rcl01007
]
Aminoacyl-tRNA synthetase
Class II (U)
NYR17_04440 (pheT)
Transfer RNA biogenesis [BR:
rcl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NYR17_04440 (pheT)
Prokaryotic type
NYR17_04440 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
WKS95987
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Position
923953..926355
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AA seq
800 aa
AA seq
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MKISNNWLKDFIKTDLNTEKISTYLTDIGLEVEGVETFESVKGSLEGIVVGKVISCEKHP
NADKLKKTTVDVGGEQLLNIVCGAPNVAEGQRVPVAVVGTKIYDKDGGFFEIKKAKIRGE
VSEGMICAEDELGLGNSHEGIMVLDETYEIGQPFANYFDLTQDEVYEIGLTPNRTDAMSH
YGVARDLSAFLSVANLTSVEFEKVNSEIFQPEGEAHFSVEVEDAERCPRYIGAILENVKV
KPSPKWLQERLKAIGLNPINNVVDITNYILHGLGQPLHAFDADKISGRKVIVGTCPEGTP
FTTLDGVERKLNGTETIIKDGNQNPMCIAGVLGGADSGVTEQTTTVFLESAYFDPVAVRK
AAKAHGLNTDASFRFERGVDVNMVRTAITKAIVLLQDLAEAQLVGDLIEVYPEKINPHYV
VFRYSKLDQILGIKIHRETIKKILKSLEIEILNEIPDGLELSVPTYRADVTREIDVIEEI
LRIYGYNKVESPTKISFTPVHLDVDHQDALESAWAGLLQGQGFHEVMNNSLTLVKDETNA
VKLLNPLSGDLAFMRKSLLEGLLQNAVYNINRKNADIKFFEFGKIYHHFEQYQERKQLAL
LISGRHEGENWLVQKSSSDFYHLKAFVSLLLSKLNIKLKEKPLEDHRFSDAIEIVSKGKT
IARLGKVAPELLKDVDMQQEAFYAEIELETAQELRQKGEFKFNDIPKFNKIKRDLALLID
QNTTYAELYEAVNSKQLPYLQGVELFDVYQGKNLPAGKKSYALRFELLSEEKTLEEQEIT
AVMNKIIGIFEKEFGAELRS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttccaataattggttaaaagattttataaaaacagacctaaataccgaaaaa
ataagcacttacctgaccgatatcggtttagaagtagagggcgtagagacttttgaaagc
gtaaaaggcagcttagaaggcatcgtggtagggaaagtcatatcttgcgaaaagcacccc
aatgcggataaactcaaaaaaacaaccgtagatgtcggtggtgagcaactactgaatatc
gtttgcggcgcacccaatgtggcagaaggtcagcgcgtgcctgtggcggtagtaggaacc
aaaatttatgataaagatggcggtttttttgaaatcaagaaagccaaaatccgtggcgaa
gtctccgaagggatgatttgtgccgaagacgaattggggctgggcaatagccacgagggc
attatggttttagatgaaacctacgaaattgggcagccttttgcaaattattttgacttg
acccaagatgaggtttacgaaatcggattaacccccaaccgtaccgatgcgatgtctcac
tatggcgtggctcgggatttaagtgcctttttatccgtagccaacctgacttcggtggag
tttgaaaaagtcaactcagagatcttccaacccgaaggcgaggcgcatttttcggtagaa
gtagaagatgccgagcgttgcccaaggtatattggtgccattttggaaaatgtaaaagta
aagccttcgcctaaatggttgcaagagcgtttaaaagccattggacttaacccgatcaac
aatgtggtggatattaccaactatattttgcacggcttggggcagccgcttcacgccttt
gatgcggataaaatctcagggcgcaaggttatcgtggggacttgtccagagggcacgccg
tttaccactttagatggggtagagcgcaaactcaacggcacggaaacgatcatcaaagat
ggcaaccaaaatccaatgtgcatcgctggggtgctgggaggcgcagattctggcgtaacc
gaacaaaccaccacggtatttttggaaagcgcctactttgatccagtggcggttcggaag
gctgcaaaagcccacggactgaataccgatgcctcgttccgctttgaaagaggtgtagat
gtcaatatggtgagaaccgcgattaccaaagcgattgtcttgcttcaagatttagcggaa
gcccagttggtgggagatttgatagaggtctatcctgaaaaaatcaatccgcattatgtg
gtgtttagatactctaaattagaccaaattttaggcattaaaatccatagagaaaccatt
aagaaaatccttaaatctttggaaatagagattttaaatgaaattccagatggtttggag
ctttcggtgcctacttaccgagcagatgtgacccgagaaatagatgtgatagaggaaatt
ctccgcatctatggctataataaagtggaaagcccgactaaaatatcgtttacgcccgtg
catttggatgtagaccatcaagatgctttggaaagtgcttgggcagggcttttgcaagga
caaggcttccacgaggtgatgaataattccctcactttggtgaaagatgaaactaatgcc
gttaagctccttaatccgcttagtggtgatttagcgtttatgagaaaatccctattggaa
gggcttttgcagaatgctgtttacaatatcaatagaaaaaatgccgacatcaaattcttt
gaatttgggaaaatataccaccattttgagcaataccaagagcgcaagcaattggcgtta
ttgatttcaggaagacacgagggtgagaattggttggttcaaaaatcaagttcagatttt
tatcatttgaaggcttttgtatcgcttttattgtcaaaattaaacatcaaactcaaagag
aaaccgttggaagaccaccgtttttctgatgcgatagaaatcgtttcaaaaggcaagacc
attgccagattaggaaaagtggcaccggaattgcttaaagatgtagatatgcagcaagag
gctttttatgctgaaatagagttggaaacggctcaagagctgagacaaaaaggagaattt
aagtttaatgatattcctaaattcaataaaattaagcgagatttagcccttttgatagac
caaaataccacttatgccgagctttatgaagcggtaaatagtaagcaattgccttattta
caaggtgttgagttgtttgatgtgtatcaaggtaaaaatctcccagcgggtaaaaaatcg
tatgcgctaaggtttgaacttctcagcgaagagaaaactttggaggagcaagaaattacc
gctgtgatgaataaaattattggtatttttgaaaaagaatttggcgcagagttgcgttct
taa
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