Riemerella columbina: NYR17_04750
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Entry
NYR17_04750 CDS
T09247
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rcl
Riemerella columbina
Pathway
rcl00900
Terpenoid backbone biosynthesis
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
Module
rcl_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NYR17_04750
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcl01006
]
NYR17_04750
Enzymes [BR:
rcl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NYR17_04750
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NYR17_04750
2.5.1.29 geranylgeranyl diphosphate synthase
NYR17_04750
Prenyltransferases [BR:
rcl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NYR17_04750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
SQS_PSY
DUF6462
Motif
Other DBs
NCBI-ProteinID:
WKS96045
LinkDB
All DBs
Position
990373..991344
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AA seq
323 aa
AA seq
DB search
MKILDQYQDLVAKAVAQYEFTETPKELYAPINYIMSHGGKRLRPIMVLMGCELFGGDLDL
AMKPALAIELFHNFTLIHDDIMDEAPLRRGKPTIHTLHGINVGILSGDALLIKAYQFFED
LEPELFKKCVSLFSETGAVLCEGQQMDVNFETDKNVTYEDYIQMITYKTGVLSAASFKIG
AMIAGATEKEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKKHAGDIFENKKTALYLL
AMEHANDEERRELNYWYSKKTDNIDKVYGVEKIFRRTRVDEKVLRLIQKHNQIGQDYLKE
INLPEDKKRPFVELANYLLKRES
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttagaccagtatcaagatttggtagccaaggcggtggcgcaatatgagttt
acggaaaccccaaaggagctctatgcccctattaactatattatgtcgcacggtggcaag
cgccttagaccaattatggtgcttatgggttgcgagcttttcggcggcgatttagactta
gcgatgaaacctgctttagccatagagctgttccataacttcaccctaattcacgatgat
attatggatgaagcccccctccgaagaggtaaaccgaccatccacacgctgcacggtata
aatgtcggcattctctctggcgatgccttgctcatcaaagcttatcaattttttgaagat
ttagaaccggaattatttaaaaaatgcgtgtctttgttttcggaaacaggcgctgtgcta
tgcgaaggtcaacagatggatgtcaattttgaaaccgataaaaatgtaacttacgaagat
tatatccagatgattacctataaaacaggcgtgctgagcgcggcatcgtttaaaataggt
gcgatgattgcgggagcaacagaaaaagaagcagaggcactctatcaatttgggaaacat
atcgggatcgccttccagattatggatgattatttagatgtcttcggcaaccaagagcaa
tttgggaagaagcacgctggcgatatttttgaaaataagaaaaccgccctttacctcctc
gcaatggagcatgccaacgatgaggagcgccgagagctcaattattggtactccaaaaaa
acagataatatagacaaagtctacggcgtagagaagattttcagaagaacccgcgtagat
gagaaagtcctccgcttgatacaaaaacacaaccaaatagggcaagattaccttaaagaa
atcaacctcccagaggacaaaaaacgcccatttgtagaactggcaaactacttattaaaa
agagaatcttaa
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