Riemerella columbina: NYR17_05035
Help
Entry
NYR17_05035 CDS
T09247
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rcl
Riemerella columbina
Pathway
rcl00300
Lysine biosynthesis
rcl00550
Peptidoglycan biosynthesis
rcl01100
Metabolic pathways
rcl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NYR17_05035 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NYR17_05035 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NYR17_05035 (murF)
Enzymes [BR:
rcl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NYR17_05035 (murF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WKS94317
LinkDB
All DBs
Position
1052550..1053824
Genome browser
AA seq
424 aa
AA seq
DB search
MNVEQFYPLYQKANKVTIDSRTIAPNDIFFAFSGVNFNAATLAEKAIADGALAAIVEQKE
FENQEKNIFYVPSTLDFLQDLARYHRQQLSIPIIALTGSNGKTTTKELIAAVLGQKFKVQ
FTQGNLNNHIGVPLTLLSIQPDHEIAVVEMGANHQKEIEALCQMAQPDYGCITNFGKAHL
EGFGGFEGVIKGKSELYHYLKNHHKTVIVNDNDAIQVEKTQGYRPKISFGTPASDYDFEL
FYEDQQVGLTYQGEAVLSQLTGAYNFTNLSVAAALGLYFEIDFERIKKAISEYQPSNMRS
QIMRKNGKTLVLDTYNANPSSMAVSLENFNQFEGSKTIIIGDMLELGEASQVEHQAILKQ
AQNLGFEQIITVGAHFKNINPSEMAFATVADLAVYLKKKPITHQNILLKGSRGIGLERIL
DEVI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagaacaattttacccactataccaaaaagcgaataaagtcaccatagacagc
cgaaccatagcgcccaatgatattttttttgcgttttcaggcgttaattttaatgctgct
actttggcggaaaaagctattgctgatggtgctttggcggcgattgtagagcaaaaagag
tttgaaaatcaagagaaaaatatattctatgtgccctctactttggattttttgcaagac
ttggcgcgttaccatcggcaacagttgagcattccaataatcgcccttacagggagtaat
ggcaaaaccaccactaaggagctgatagccgctgttttggggcaaaaatttaaagtccag
tttacccaaggcaatcttaataatcatattggagtgccgctcaccttgctgtccatccag
ccagaccacgaaattgcagtggtggaaatgggcgccaaccatcaaaaagaaatagaggcg
ctttgccaaatggcacaaccagattatggctgtattaccaattttggtaaggcacattta
gaaggttttggcggttttgagggcgttatcaaaggcaagtcggaactttaccattacctt
aaaaatcatcataaaacggtgattgtcaatgataatgatgcgatacaagtagaaaaaacg
caaggatatcgtccgaaaattagttttggcacgcccgcttcggattatgattttgaactt
ttttatgaagatcaacaagtggggctcacctaccaaggcgaagcggtattatcccaatta
acaggggcttataatttcaccaatctttctgtggcagcggctttgggactttattttgaa
attgactttgagcggatcaaaaaagccatatccgaatatcagcccagcaatatgcgctct
caaattatgcggaaaaatggcaaaaccttggttttagacacctataacgccaatccgagt
agtatggcggtttctttggaaaattttaaccaatttgaaggttctaaaaccatcatcatt
ggcgatatgctggaacttggcgaggcttctcaagtggagcaccaagccattttaaaacaa
gcccaaaatttaggctttgagcaaattattaccgtaggcgcccattttaaaaatatcaat
ccatcggaaatggcatttgctacggtggcagatctggctgtttatctaaaaaagaagcct
atcactcatcaaaatatcctattaaaaggctcacgaggtataggtttagaacggatttta
gatgaggtgatttag
DBGET
integrated database retrieval system
