Riemerella columbina: NYR17_05440
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Entry
NYR17_05440 CDS
T09247
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rcl
Riemerella columbina
Pathway
rcl00071
Fatty acid degradation
rcl00362
Benzoate degradation
rcl00650
Butanoate metabolism
rcl01100
Metabolic pathways
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
rcl01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NYR17_05440
09103 Lipid metabolism
00071 Fatty acid degradation
NYR17_05440
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NYR17_05440
Enzymes [BR:
rcl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NYR17_05440
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Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Pyr_redox_2
NAD_binding_2
Thiolase_N
UDPG_MGDP_dh_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
WKS94390
LinkDB
All DBs
Position
complement(1147799..1150198)
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AA seq
799 aa
AA seq
DB search
MKRRIKHITVLGSGIMGAGIAAHFANIGVEVLMLDIVPFELTDAEQKKGITKEDQAFRNR
IATENLAKLKKASPALLYSPQFADRISVGNFEDDMPKIKNTDWIIEVVVERLDIKKSVYE
QIEKYRQPGTLVSSNTSGIPIHLLTEGRSEDFKHYFAGTHFFNPVRYLPLLEIIPTADTL
PEVVNFYMEYGAKFLGKTTVLAKDTPAFIANRIGVFSMMDLLHNVKKLGLSVSDVDKLTG
PVIGRPKSATFRTADVVGLDTLVHVANGIRESGTETNDFNDVFQLPDYIQTMMDNQWLGS
KSGQGFFKKVKNADGKSEILGLNLETLTYEAQEKTAFPTLELTKNIDQPIRRFKVLIDGK
DKAGELYSLSLGALFAYVSHKVPEISDEIYKIDDAMRAGFGWENGPFEIWDAVGVQRGIE
LAKEAGYEVSDWVKQLASEGKTFYQINNEGHSTFFHQNEYQPIPGQEAFIILDNIRKNKT
LWSNSGSAIQDLGDGIINFEIRSKMNSLGGEVLDGLNRAIDLAEKEYDGLVVANQGANFS
VGANLAMILMMAIEQDWDDLNMAIAYFQKSMMRLRYSSIPTVVAPFGMTLGGGCEMTLHA
DRVVAAAETYIGLVEVGVGVIPGGGGTKEMTLRTMQQVHKDDVKNNRLRDAFMNIAMGKV
ATSAYEAFDMGILQHGKDFVVVNKNRQIAEAKKVAKLMAEQGYTQPIPQKVKVVGKDALG
MFYVGTDQMLAGNYISEHDKKIADKLAYVMAGGALSEETWVTEQYLLNLERETFLQLCGE
RKTLERIQYMLQKGKPLRN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacgcattaaacacattaccgtattaggctcagggattatgggcgcgggcatt
gctgcacattttgccaacattggcgtagaggtgctgatgctggacattgtcccttttgag
ctcactgatgccgagcaaaaaaaaggcatcaccaaagaagatcaagcttttagaaaccgt
attgcaacggaaaatttggctaaactcaaaaaagccagtcctgcactactctactcgcct
cagtttgcagaccgcattagcgtaggaaattttgaggatgatatgccaaaaattaaaaat
accgattggattatagaagtggtggtagagcgcttagatatcaaaaaatcggtgtacgag
cagattgaaaaataccgccagcctggcactttggtgtcttccaacacttcggggattcct
atccacctccttaccgagggcagaagcgaggatttcaaacactatttcgctggtacccac
ttctttaatcctgtgcgctatctccctctattagagattattccaacggcagacaccctg
ccagaagtggtcaacttctatatggaatacggggctaagtttttaggaaaaacgaccgta
ttagccaaagatacgcccgctttcattgcgaacagaattggcgttttcagtatgatggat
ttactccataatgttaaaaaactcggactttcggtgtctgatgtggataaattaacaggt
cctgttattgggcgccctaagtcggcaactttccgtacggcagatgtggtgggcttagac
accttagtccatgtagccaatggcattcgagaaagtggcaccgaaaccaatgattttaat
gatgttttccaactgccagactacatccaaacgatgatggataaccagtggttaggctct
aaatctggacaaggcttcttcaaaaaagtgaaaaacgccgatggaaaatctgaaatttta
ggtttaaatctggaaaccctcacctatgaagctcaagagaaaaccgccttcccaacttta
gaattgaccaaaaatatagaccaaccgattaggcgttttaaagttcttattgatggcaaa
gacaaagctggcgagctctatagcctttcattaggggcgctttttgcgtatgtgtctcat
aaagtacctgagatttctgatgaaatttataaaattgatgatgctatgcgcgcaggtttc
ggctgggaaaatggaccttttgaaatttgggatgccgtgggcgttcagcgtggtatagag
ttagccaaagaggctggctatgaagtttccgattgggtaaaacaactggcaagcgaaggc
aaaactttctaccaaatcaataatgaagggcattctaccttcttccatcagaacgaatat
cagcctattccagggcaagaggctttcatcattttggataacatccgaaaaaataaaacc
ttatggagcaactccggctctgccattcaagatttaggcgatggcattatcaactttgaa
attcgctctaaaatgaactccctcggtggcgaagttttagatggcttaaaccgtgcgata
gaccttgcagaaaaggaatatgatggtttagtggttgccaaccaaggggctaatttctcc
gtaggagctaatttagcaatgattctgatgatggcaattgagcaagattgggatgacctc
aatatggcaattgcttacttccaaaaatcaatgatgagactccgttattcctctatccct
accgtggtggcgccgtttggaatgacccttggtggcggctgcgagatgaccctccacgcc
gatcgtgtggtggcggcggcagagacttatatcggattggtagaagtaggtgtgggcgtg
atccctggcggcggcggtactaaggagatgaccctaagaaccatgcaacaagtccacaaa
gatgatgttaaaaacaaccgcttgcgcgatgcctttatgaacatcgcaatggggaaagtc
gctacttctgcctacgaagcctttgatatgggcatccttcagcacggtaaagattttgta
gtcgtaaataaaaatagacaaattgccgaagccaaaaaagtagcaaaactaatggcagaa
caaggctacacacagcctattcctcagaaggttaaagtagtcggcaaagatgcattaggg
atgttctatgtaggcacagaccagatgttggcaggaaactacatctctgaacacgataaa
aaaatagcggataaactcgcttatgtgatggctggtggtgccctctccgaggaaacttgg
gtaacggaacagtacctcctcaacttggagcgagagaccttccttcaactctgtggcgag
agaaaaaccttagagcgtattcagtatatgttacaaaaaggaaaaccactaagaaactaa
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