KEGG   Riemerella columbina: NYR17_05770
Entry
NYR17_05770       CDS       T09247                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rcl  Riemerella columbina
Brite
KEGG Orthology (KO) [BR:rcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcl03032]
    NYR17_05770
   03036 Chromosome and associated proteins [BR:rcl03036]
    NYR17_05770
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rcl02048]
    NYR17_05770
Enzymes [BR:rcl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NYR17_05770
DNA replication proteins [BR:rcl03032]
 Prokaryotic type
  DNA Topoisomerases
   NYR17_05770
Chromosome and associated proteins [BR:rcl03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    NYR17_05770
Prokaryotic defense system [BR:rcl02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    NYR17_05770
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C HATPase_c_3 UFD1_N2
Other DBs
NCBI-ProteinID: WKS94451
LinkDB
Position
1209537..1211390
AA seq 617 aa
MSNASQQVNYSEDNIRTLDWQEHIRLRPGMYIGKLGDGSSADDGIYILLKEILDNSIDEF
RMKAGKRIEIKLDDKKMTVRDYGRGIPLGKVVDAVSKMNTGGKYDSKAFKKSVGLNGVGT
KAVNALSDYFRVKSVRDGQSKTAEFSRGNIIENHPEEPSSDRNGTEIVFIPDQEIFLNFK
FRKEYIERMLRNYAYLNPGLKIIFNGETYYSENGLKDLLEEEMETEALYPIIHLKGEDIE
VAITHSDKSQTETYFSFVNGQNTTQGGTHLNAFREAYVKTIREFFNKNFDASDIRKSIIA
AISINVEEPVFESQTKTKLGSNDVGPEGPTVRTFVIDFLKTKLDNFLHKNPEIAEAIHKK
ILVSERERKELSGIQKLARERAKKVSLHNKKLRDCRQHYNEQKAERKSETQIFITEGDSA
SGSITKSRDVETQAVFSLKGKPLNCYGLTKKVVYENEEFNLLQAALNIEESLEDLRYNQV
IIATDADVDGMHIRLLMITFFLQFFPDLIKNGHLYILQTPLFRVRNKKETRYCYTEEERV
RALQELGKNPEITRFKGLGEISPDEFKHFIGKDIRLEPVVIGKDQTIDQILEFYMGKNTP
DRQQFILENLVVEDSDI
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgagtaacgcatcgcaacaagtaaactattctgaggacaacatcagaacattagattgg
caggagcacatacgccttcgtccggggatgtatattggaaaattgggagatggctcttct
gcggatgatggtatttatatcctcctgaaggaaatcttggacaactctatcgacgagttc
cgaatgaaagccggaaaacgcatagaaattaagttagatgataagaaaatgaccgtccga
gattatgggcgaggcattccgctcggcaaggtggtagatgcggtttctaaaatgaatacc
ggcggtaaatacgatagcaaagccttcaaaaaatcggtggggcttaacggtgtggggacc
aaggcggtgaacgccctttccgactattttagagtgaaatccgtgagagatggacagtcc
aaaacggcagaattttcgcgtggaaacatcattgaaaatcaccccgaagagccatcttct
gaccgcaatggtaccgagattgtctttatccctgaccaagagattttcctcaattttaag
ttccgaaaggagtatatagagcggatgttgcgcaattatgcttaccttaatccagggctt
aaaatcatcttcaacggcgagacttattattccgaaaatggactaaaagaccttctcgaa
gaagagatggaaaccgaggcgctttaccccattatccaccttaaaggcgaagatatagaa
gtggcgattacccactcggataaatctcaaacggagacctatttttcctttgttaatggg
caaaataccacgcagggcggcacgcacctcaatgcgtttagggaggcttatgtgaaaacc
atcagagagttttttaataaaaattttgatgcttcggatatccgaaaatctatcattgct
gccatctcgatcaatgtggaagaacccgtttttgaatctcaaaccaaaaccaaattaggc
tctaatgatgtaggtcctgagggcccaacggtgcggacttttgtgattgattttttaaag
accaaattggacaacttcctccataaaaatccagaaatagccgaggctattcataagaaa
atattggtttctgagcgggagcggaaggaactttctggcatccagaaattagcgcgagag
cgagccaaaaaagtttctctacataacaaaaaactgagggactgtcgccagcattataac
gagcaaaaagccgaacgaaagtcggaaacacagattttcatcaccgagggcgattccgct
tctggctccattaccaagtcccgagatgtggagacccaagccgtattctcgctcaaagga
aaacccctgaattgctatggactaactaaaaaagtggtttatgagaacgaggaatttaac
ctattacaagcggcgctcaacattgaggaaagtttagaagatttaagatacaaccaagtg
attatcgctaccgatgccgatgtggatggtatgcatatccgcttgctgatgattactttc
ttccttcagtttttcccagatttaattaaaaatggacacctttatatcctgcaaacgcct
ttgtttagggtaagaaacaaaaaggaaacccgctattgctatacggaggaggagcgcgtg
agagccttgcaagagttgggaaaaaatccagaaatcacgaggtttaaaggattgggcgaa
atttctcctgatgagtttaaacatttcatcggcaaagatatccgcttggagccagtggtg
atcggcaaagaccaaaccatagaccaaattttggaattttatatgggcaaaaatacgcca
gacagacaacaatttatccttgaaaatttagtggtggaagattctgatatttaa

DBGET integrated database retrieval system